Hippoglossus stenolepis (Pacific halibut): 118112140
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Entry
118112140 CDS
T08308
Symbol
eda
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118112140 (eda)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118112140 (eda)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Tumor necrosis fators
118112140 (eda)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
118112140
NCBI-ProteinID:
XP_035017090
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All DBs
Position
7:complement(11608998..11621759)
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AA seq
381 aa
AA seq
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MARDGPHAEDFPDKVMPGAAPCTCGKKCRGRGGSVVFLGLFLLSLSLHAITLVCYLDLRS
EVKREIIHQKRDTVLTLSGGDLADPAAVLSLGPPRLDSGGRGAAGGGSSGSGGGGEVHEE
RLLHRNSDFRATDDNRGITQRAKRSPGKQSDSESTGKEGRKGRKKGKKRSVPGPPGPPGP
PGPQGPPGIPGIPGIPGSIGVGPAGPPGPPGPQGPPGAQGPAGVLDKTKTKEFQPAVVHL
QGQETTIQVREDLSEGILRNWKMVSIHHRVFKMHPRSGELEVLVDGVYFIYSQVEVYYLN
FTDIASYEVMVDSNPFLRCTCSIETGQRKFNTCYTAGVSLLRAGQRISIRIVYEDTLISM
TNHTTFLGSVRLGEAPSAGQN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgacggtccccacgcggaggacttcccggacaaagtgatgcccggagcggcg
ccctgcacgtgcggcaagaagtgcaggggtcgcggcggcagcgtcgtcttcctgggatta
ttcctgctgtcgctgtccctgcacgccatcaccctcgtctgctacctggacctgcgctcc
gaagtcaagcgggagattatccaccagaagagggacaccgtgttgacgctgagcgggggt
gacctggccgacccggcggcggtgctctcgctcggccccccgcggctggactccggcggc
agaggagcagcaggaggcggcagtagcggcagcggaggaggaggagaggttcatgaggag
aggttactgcacagaaatagcgacttccgtgccacagatgataacaggggcataactcag
cgagcgaaaaggagtcccggcaagcagtcagattcggaatcgactggaaaggaaggaagg
aaagggaggaaaaaagggaagaaaaggtctgtgcctggcccccctggcccccccggtccc
ccaggcccacagggcccaccgggcatccctggaatacctggtattccaggaagcattggt
gtggggcctgcaggacctcctggacctccagggccacagggacctccgggcgctcaaggt
ccagcaggggttctggataaaactaaaacaaaggaattccagcctgcagttgttcacttg
caaggacaggaaacaaccatccaagtgagagaagatctgtctgaaggcatccttaggaac
tggaagatggtgtccatccaccaccgtgtgtttaaaatgcaccctcgctctggagagctg
gaggtgctggtggacggtgtctacttcatatatagtcaggtagaagtgtactacctcaac
ttcaccgacattgccagctatgaggtgatggtggactccaacccgttcctccggtgcacg
tgcagcattgagacaggccagcgcaaattcaacacctgctacacggccggagtgagcctg
ctccgcgccggccaaaggatttccatacgtatagtgtatgaggacacgctcatcagcatg
accaaccacaccacgttcctgggaagcgtcagacttggagaggctccatctgctggacag
aactga
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