Hippoglossus stenolepis (Pacific halibut): 118112153
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Entry
118112153 CDS
T08308
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118112153 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsp01007
]
118112153 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118112153 (hars)
Enzymes [BR:
hsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
118112153 (hars)
Amino acid related enzymes [BR:
hsp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118112153 (hars)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118112153 (hars)
Prokaryotic type
118112153 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
118112153
NCBI-ProteinID:
XP_035017115
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All DBs
Position
7:complement(1518698..1529273)
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AA seq
522 aa
AA seq
DB search
MDMLGMFCVRACSGLVAFRTASHVRFLHSFPGITVAQIDEEVAKLLELKARLGGDDGKHQ
FVLKTAKGTRDYNPKQMAIREKVFNTITSCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDAMIPDAECLKIVHEILSELDLGDFCIKVNDRRILDGMFAVCGVPDDKFRS
ICSTVDKLDKMAWEDVKKEMVNEKGLSEEVADQIGEYVSMKGGMDLAERLLQDQKMSQSK
DACAGLSDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEALLTQAGVAAVSKEAQ
SGAPSEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAVK
IRTTEVQVMVASAQKNLLEERLKLITELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLV
AILGEQELKDGVIKLRIVATREELDISRADLIGEIKKRTSEA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggacatgctgggcatgttttgtgttcgtgcttgctctggtctggtggcctttcggact
gcatcacatgtccgatttctccattcttttccggggatcactgtggctcagattgatgaa
gaggtagccaaactgctggaactgaaggctcggttaggaggtgatgatggaaaacatcag
tttgtcctcaagacagcaaagggaacaagggactacaaccccaagcagatggccatcaga
gagaaggtcttcaacacaatcaccagctgcttcaaacgtcacggagcagagaccatcgac
acacctgtttttgaactgaaggaaacattgacagggaaatatggagaagattccaagctc
atctacgaccttaaagaccaaggaggagagctgctgtccctcagatatgacctcactgtg
ccctttgcccgctacctggcaatgaacaagataaccaacatcaagcgctaccacattgct
aaggtctatcgccgtgacaacccagccatgacccgcggacgctacagagagttttatcaa
tgtgattttgacatagcagggcagtatgatgccatgattccagatgctgagtgtctgaag
attgtccatgaaattctcagtgagctggatctcggagacttctgtatcaaggtcaatgac
agacgtattctggatggtatgtttgctgtgtgtggtgttccagatgacaagtttcgtagc
atctgttcaactgtggataaactggacaagatggcgtgggaggacgtaaagaaggagatg
gtgaatgagaagggcttgtcagaggaggttgctgaccagattggggagtacgtcagtatg
aagggtggaatggacttagcagagcgccttcttcaggaccagaaaatgtctcagagtaaa
gatgcctgcgctggcctctccgacatcaagctgctcttcagctacctgcaactcttccag
gtcacagacaaggtggtatttgacctcagtctggcccgtggactggattattatacagga
attatctacgaggcattgctaactcaggcaggtgtggccgcagtctccaaagaagcccaa
agtggggccccttcagaggagagtgtcagtgtaggcagcgtggctggagggggtcgctac
gatggccttgtcggcatgttcgaccctaagggcaggaaagtgccgtgtgtgggcgtgagc
atcgggatcgagaggatcttctccatcatggagcagaaggctgaggcgtcagcagtgaag
attcgtaccacagaggttcaggtgatggtcgcatctgctcagaagaacctgctggaggag
agactcaaactcatcaccgagctctggaatgctggcattaaggcagaggttatgtacaag
aagaaccccaaactgctgagtcagctgcagcactgtgaggagtcgggcatccccctggtg
gccatactgggagaacaggagcttaaagatggagtgatcaaactacgcattgtggccacc
agagaggagttggatatttccagagcagatcttattggcgagatcaagaagaggacgtct
gaggcctaa
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