Hippoglossus stenolepis (Pacific halibut): 118112229
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Entry
118112229 CDS
T08308
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K20686
Rho guanine nucleotide exchange factor 9
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118112229
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118112229
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
118112229
NCBI-ProteinID:
XP_047196566
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Position
7:8792875..8839479
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AA seq
1157 aa
AA seq
DB search
MEQTDNPAPESNNPNGFVNRVFSVSLDVENETSSVYIQEPGPVPAEGQGGTQAASSQSPV
KDRQEVNRRPRAPGGIWKILNRKRAMSELERRPHSMILPGEASIPKLSFADKVRSFKKLK
SPSVFRGKAGKLSTAKFSSSLVDEESFCGDIGTPQQSSRGPLRHRGKRHSYAGYTAEFDC
SFEDIDFSATLDSHQPTVTGEAVTQNGCKSSERVSYTKRSHNNSNNCNKTASGYEEPSIK
GSLRNHQGRGRRHKDVWSYLRRISLLGKANPVYSESFDSELPSLDKTMDSDYGSVDFEIV
RDCQPPPPKHSDTKGHFGGLFKFFNSVAETARKWRTTSRSFSPPEGETTPMSSPRAPQRT
VDNIHSVSLTLHSEGLPTSQPNPSSPVNIKSLHSSCFESEATVPATGGRSPKVVLKAFRA
CPRSQAVNGLQSSEGTDKHIDGEANHTSTAIVENHIHQSCPNTESKDVTGVKRDPLPCLC
QEGKVEGQTGNEQDSKDAPPDSHQIQEVNVKSQQGDKESTTNSVPASDSTEEIFKALSRP
PGVSPLEPPLRASLQRCSSLPLSPSTLAALARLLPHSDMGQLSSSVRLRSGDSGSCRRRR
LLRPGSEPLQVNILISGGSIVNAEAVWDHVTMADRELAFKAGDVIKVLDASNKDWWWGQI
DEEEGWFPASFVRVEPHPPQPQTKQVFYINPIATPRFQNTTSKLWVNQEDGGAEPSEGTS
EVQNGHLDPTNDCLCLGSPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLRQCRKRV
DMFNDDQLKVIFGNIEDIYRFQMGFVRDLEKQYNTEDPHLSEIGPCFLEHQDGFWIYSEY
CNNHLDACMELSKLMRDGRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELL
KYTAQEHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSS
ELIYTGELSWIYQPYGRSQQRVFFLFDHQLVLCKKDLIRRDILYYKGRIDMDRYEVRDAL
DGRDDDFNVSVKNAFKLCNKDSEEIHIFLSKKPEEKIRWLRAFHEERKMVQEDEKIGFEI
SEYQKRQAAMTVRKVTKQKGVNRCTPPSYPPPQDPLSAGQYEVTEDMAQGEVFEFSQSKR
GQAPFWQNFSRLAPFKK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggaacagacagacaaccctgcccctgagagcaacaaccctaatgggtttgtcaaccga
gtgtttagtgtttctctggatgtggagaatgagacgagcagtgtttatattcaggagcct
gggccagtgcctgcggaggggcagggagggacccaagctgcctcttctcagtcccctgtc
aaggacagacaggaggtcaaccggaggccccgtgccccgggcggcatctggaaaatcttg
aatcgaaagagagctatgtccgagctggagaggcgaccccactccatgatcttgcccggg
gaggcttccatccctaaactctcatttgctgacaaagttcgctccttcaagaagctcaag
tcgccctctgtgttcaggggcaaggcagggaaactgtcaacagcaaagttcagcagctcg
ttggttgacgaggagtctttctgtggggacattggcactccacagcagtccagtaggggc
ccgctacgacaccgtggcaagcggcactcgtatgctggctacactgccgaatttgactgc
tcgtttgaagatattgacttctcagctactttggacagccatcagcccactgtgacagga
gaggctgtgactcagaatggttgtaaatcatctgaaagagtttcctataccaaaagaagc
cacaacaattcaaacaactgtaacaaaacagcttcaggctatgaagagcccagcatcaag
gggagcctgcgcaaccaccaggggagagggaggaggcacaaagatgtgtggagttacctg
aggaggatttctcttttggggaaggccaaccccgtttactcagagagctttgactctgaa
ctcccctctctggacaaaaccatggactcagactatggctctgtagactttgagattgtc
agagactgtcaacctccgcccccgaaacactccgacaccaaggggcactttggtggcctg
ttcaagtttttcaacagcgtagcagagacggccagaaaatggcggacgacatctcgttcc
ttttcgcctccagagggagagacgactccgatgagctccccgagggctccacagcgcaca
gtggacaacattcacagtgtgtccctgacacttcacagcgaagggcttccaacatcccag
cctaacccgtcgtcaccagtgaacattaaatccttacactccagttgctttgaaagcgag
gctacagtgcctgcgacagggggacgatcccctaaggtggtcctgaaagcctttagggca
tgcccaagatctcaagctgtcaatggcctccagagctctgagggtacagacaaacatata
gatggagaggcaaaccacacgtccacagccatagtagagaatcacatccatcagtcatgt
ccaaacacagagtctaaagacgtaacaggggttaaaagagatccattaccctgtctctgt
caagagggaaaggtagagggacagacaggaaatgagcaggattccaaggatgctccacct
gactcccaccagatacaggaagtgaatgtgaaatcacaacaaggtgataaagagagtaca
accaatagcgtgcccgcatcagattccacagaggaaatatttaaggccttgtctcgcccc
ccgggtgtgtcaccattagagcccccacttcgggcatctctccagcggtgcagctccctg
ccgctttcccccagcacactcgcggccttggcgcggctcctgcctcactcagatatgggt
cagttgtcatcgtcggtgcgtttgcggtctggagactccgggagctgcaggaggaggagg
ctgttgagacctggctcagaaccactgcaggtcaacatattgataagtggaggttcaatc
gtcaatgctgaggcggtatgggaccatgtgaccatggcggaccgggagttggcgtttaag
gccggtgacgtcatcaaggtgctggatgcctccaacaaggactggtggtggggccagatt
gatgaggaggaaggatggttccctgccagctttgtacgggtggaaccccaccctcctcag
ccccaaacaaaacaggttttctatatcaaccccatagcaactccacggttccaaaacacc
acgtcaaagctgtgggtgaaccaggaggacgggggagcggagccatctgaggggaccagt
gaggtgcagaacgggcacctggacccgaccaatgactgcctgtgtctgggctcgcctctc
cagaaccgagaccagatgagagccaacgtcatcaatgagatcatgagcacagagagacac
tacatcaaacacctcaaggacatctgtgagggctacctgcgccagtgcaggaagcgcgtg
gacatgttcaacgacgaccagctgaaggtcatctttggcaacatcgaggacatttaccgc
ttccagatgggcttcgtcagagacctggagaaacagtacaacacggaggacccgcacctc
tctgaaatcggaccatgctttttagaacatcaagatggtttttggatctattcagagtac
tgcaacaaccacttggacgcctgtatggagctgagcaaactgatgagggatggcaggtac
cagcacttcttcgaggcctgtcgcctcctccagcaaatgattgacatcgccatagacggc
ttcctgctcacccctgtccagaaaatctgcaaatatccactccagttggccgagctgctc
aaatacaccgcacaggagcacagtgactatcgatacgtggcagcagccctggcagtaatg
cggaacgtcactcagcagatcaacgagaggaagaggaggctggagaatattgacaaaatc
gcccagtggcaagcttctgttctggactgggagggagatgatatcttggacaggagctcg
gagctcatctacacaggggagttgtcatggatctatcagccgtatggacgcagccagcag
cgagtcttcttcctctttgatcaccagctggtcctctgtaagaaggacttgatacgcagg
gatatcctgtactataagggccgcattgacatggaccgctacgaggtgcgggacgcctta
gacgggcgcgacgacgacttcaacgtcagcgtgaagaacgccttcaagttgtgcaacaaa
gacagcgaggagatccacatcttcctgtccaagaagccggaggagaagatccgctggctc
agggccttccacgaggagaggaagatggtgcaggaggacgagaaaatcggtttcgagatc
tctgagtaccagaagcggcaggcggccatgacagtgagaaaggtgactaaacagaaaggt
gtaaacaggtgcacgcccccctcatacccgcccccgcaggaccccctcagtgcagggcag
tatgaggtaacggaggacatggcacaaggagaggtttttgaattcagtcaatccaaaaga
ggccaggctcccttctggcagaattttagtagattagctccatttaagaaatag
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