Hippoglossus stenolepis (Pacific halibut): 118112259
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Entry
118112259 CDS
T08308
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118112259 (rlim)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118112259 (rlim)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118112259 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
DUF3199
zf-RING_4
NUP120_helical
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
118112259
NCBI-ProteinID:
XP_035017313
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All DBs
Position
7:complement(12380025..12386327)
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AA seq
644 aa
AA seq
DB search
MEGSDSSEQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFNRLQQIKDGPEQPNNNTPSTEVGEEPVVQPESSEDPAGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEGQEQEVVAS
AEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVSQEILEESPSSPAALPVQPPLSLSPR
RGQRRPRSRSPEPRRTRARTARSRSPLSLDQLDGLPNPRPALNSQVPTPATSSPPLPQVE
GSSRTRQHVLSRQSTADSDVPPSRAGAESVPEVQNVESQEGEAAGGEGGAAGRRPPTIML
DLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVST
IRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGASTPSDLGE
TLNNPEATPAAVSAPAADADEPPAAAGVRARTVETDMVEGLATAPPASGGRARPRPAISL
EEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGENDALKTCSVCITEYAEG
NKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacagttcggagcagagtggcagtgaccagcccgagtcgcagcgcaga
aggcagctggaccgcctggacagggaggaggccttctatcagtttgtcaacaatctcagt
gatgaggactatcggctcatgagagacaacaatctcttgggaaccccaggagaggtaacg
gaggatgagctatttaatagacttcagcaaatcaaagatggtccagaacagccaaataac
aacacccctagtactgaagttggagaagagccagttgtacaaccagaaagctcagaggat
cctgccggtggagatagtctcctggactggctaaacacagtgagacgcaccggcaataca
accagaactggacatcgtggaaaccagtcatggcgagcagtaagccagaccaacccaaac
agtggcgattttcgtttcagccttgaaatcagcgtgaaccgtaacctggccgaacagcag
gcagctgccgaaggggagcaagagtctccagagggtcaagaacaagaagtagtagcaagt
gctgaacctcaggtccccatggagacagaagtggtggaagaaccagttgtagaggagttg
gctgtcatagtggagccagagcctgagctagaagaggttgtttctcaagagattttagaa
gaatctcccagctcacctgctgccttgccagtacaacccccactttctctttctccacgc
agaggtcaaaggagaccccgaagccgaagtccagaaccacgcaggacaagggcgcgtaca
gccaggagccgttcccctctgagcttggatcagctggatggtctccctaatccacgtccg
gctctcaactctcaagtccctacccctgctaccagttctccccctctgcctcaagtagag
ggcagttcacggactcgacagcatgttctttccaggcaaagcacagctgacagtgatgtt
ccgccatctagggcaggtgccgaatctgtcccagaggtccaaaatgttgaatctcaggaa
ggagaggctgctgggggagagggtggtgcagcaggacgccgtccacctactattatgcta
gatctccaggtgcgtcgtgtgcgtccaggcgaatatcggcaaagagacagcattgccagt
cgtacccgctcacgctcccagaactcaaacaacacatttctttatgaaagtgagcgtggc
ggatttcgtaggactttctcacgctctgagcgtgctggtgtgaggacctacgtcagcact
attcgcatccctattcgaagaatctctgatgcaggtttgggagaggccacatcaatggct
ctccagtctatgattaggcagattatgactggttttggtgaacttggctacctcatggat
tcagactctgactcttcagattcaaaccgtggagccagcacaccttcggatctgggtgaa
accctcaacaacccagaagctactcctgctgctgtttcggctcctgctgccgatgctgat
gagccgcctgcagctgctggagtcagagcaaggacagttgagactgatatggttgaggga
cttgccacggctccgccagcatctggtggcagggctcgacctagaccagctatcagctta
gaggagcccagctcactgcccttcctgcgactcgcccacttcttccttctaaatgatgat
gatgaggaccagccccaggggcttactaaagagcagattgacaacctctccatgcgcaac
tttggcgagaatgatgccttgaaaacttgcagcgtctgcataacagagtatgcagaaggt
aacaagctacgtaaactaccctgctctcatgagtatcatgtgcactgcattgatcgctgg
ctctctgaaaactcaacttgccccatctgccgcagggctgtcctggtgtcggccaaccga
gagagtgtggtgtag
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