Hippoglossus stenolepis (Pacific halibut): 118112331
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Entry
118112331 CDS
T08308
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118112331 (rnf130)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118112331 (rnf130)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118112331 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PspB
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118112331
NCBI-ProteinID:
XP_035017440
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All DBs
Position
7:28013832..28029881
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AA seq
415 aa
AA seq
DB search
MSLRWTYLPVSLVLVLVLTGSVSTARSDRNMVSEEYVGATVNATVLDGRGNTVHMMSSDD
GTYGQNSPKVDTRGVVIAPAPHHGVVDRQGCDPSTRFLVPPRSVHWVALLQRGNCTFKEK
ILKAAAYNATAVLIYNNSTDKTVKMGHEGTGDTVAVMITEMYGKEILAHLDRNLTVLVSV
VVGQRGPTKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRSQRRLGDAAK
KAIGKLTTRTVKKGDKETDPDFNHCAVCIEAYQLNDVVRILPCKHVFHKMCVDPWLNEHC
TCPMCKLNILKALGIMTSLPCVDSVVLDVERLGVSQASSSQRTLLGDSNQPSISLEPLSP
PHPEATPRTPADITIAVTSGGHFFNRNSMSPRSIVSEMELPDIQASLDLYDDNKS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaggtggacttatctcccggtttcactggtcctggtcctggtcctgacgggt
tctgtgtccacagctcgctctgacaggaacatggtgtctgaggagtacgtgggcgccact
gtaaacgccacagtgctggacggacgaggaaacaccgtccacatgatgagcagtgacgat
gggacgtatggacagaattcacccaaagtggacaccaggggggtcgtcatcgcacctgca
ccgcatcacggagtggtggaccggcagggctgcgaccccagcactcgtttcctggttcct
cctcgtagtgtccactgggtggcactgctgcagagaggaaactgcacttttaaagagaag
atactgaaggcagcagcctacaatgccacggctgtcctcatctacaacaactccaccgac
aagacggtcaagatgggacatgaaggtactggtgacacggtggcggtgatgatcacagag
atgtatggtaaagagattttggctcacctggacaggaacctgacagtcctggtctctgtg
gttgtgggtcaacgtggtcccacaaagaacatcaaccgaggctcgctggtctttgtctcc
atctccttcatcgtcctcatgatcatctcatcggcctggctcatcttctacttcatccag
aagatccgctacaccagcgctagggaccgcagtcagcgtcgtctcggtgatgcggcaaaa
aaagccattgggaagttgacaacgaggacggtgaagaaaggagacaaggaaactgatccg
gactttaaccactgtgccgtgtgtattgaagcgtaccagctcaacgatgttgttcgaatt
cttccctgcaaacacgtcttccataaaatgtgtgtggacccgtggctgaacgaacactgc
acctgtcccatgtgtaagctcaacatcctcaaagcgctcggcatcatgaccagtctgccc
tgtgtggacagcgtggtgttggacgtggagcgtctgggtgtcagtcaggcgtccagcagc
cagaggacgctgctgggtgacagcaaccagccatccatcagcctggagccactcagcccc
ccccaccctgaggccacacccagaacacctgctgacatcaccattgccgtgaccagcggc
gggcacttcttcaacaggaattcgatgtctcctcgcagcatcgtcagtgagatggagctg
ccggacattcaggcctcgctggacctctacgacgacaacaagtcatga
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