Hippoglossus stenolepis (Pacific halibut): 118112371
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Entry
118112371 CDS
T08308
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118112371 (npas4a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118112371 (npas4a)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
118112371
NCBI-ProteinID:
XP_035017513
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Position
7:17804485..17810331
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AA seq
936 aa
AA seq
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MYRSTKGASKARRDQINAEIRYLKDLLPISDADKARLSYLHIMSLACMYTRKSVFFTEEA
GTAASLEESRQFLLFHELSELMQALPGFLMLLTGEGKLLYMSDSVSEHLGHSMVDLVAQG
DSVYDIIDASDHLIMRTNLSASTSPEIDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLPP
PTTSPAVGSYWTSNTVWVCFCSPLEPHPSRSGPGTERDMTSSPPQAEANLFLSCFYSHHG
RDMRLETAQDSVSTYLGFDVTALRARSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVV
RVQAQDQSWVWLYMVLQLQPGEIPISSNNYIISESEAWSVRQQLTSEQTQLTLVLTTGTS
QQEGLSMQSPETLSSPDQVFTPGSSGLSAQSFDFSTAGCSVGSSDDPGSSTAEAMQVEGD
PRSSISSMEEDSFFQQHPAENPSAASSPTPVTVETVADLDFLTQNILLPPSFQLNPPLPV
LPLPLPPVPTSQAQQTKEFVCTPPYTPLISGANFPFSEPLFSFDPTGTTTPPPSTTTASA
TTSLAPSASSTTQPTTASSPAPPTTLSSKLSLTLPTLTTDLLFPVEPCSGSLYEKLPPTP
DSPGDDDCTVMTLPEVRGPLYVDVPMGPLQCPPEGLLTPEASPGKQPCLSFFSLEREREK
ERAEISLLAQHISSLAEGFYLDPLLSKLSPPSMSPSSSPPSPFLSPNMETPEVESVHMQR
EFYPIKAWRGLDIPMFLDEDDSLFEESILQTLLQDDFAPPQTPVPSFPSPCTSPMLNPSS
PGSPQIPVCWHQPSQFEGVGHFCSVQSAQCNSMDVCGATEASEAGMMAEGEGLAEEAMEI
EVVSSPVSCCSSIPASPPLILTASPSPSTSMPIGSPTPAVSCTQSLLEELAVLEPMFGAG
ASIAPGLGQQPELYQLQCHPSPQCFHKDGSGSVPPF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggagcatccaaggctcggcgggaccagatcaacgccgagatc
cggtacctgaaggacttgttgcccatctccgatgcagataaagcgcggctctcgtacctg
cacatcatgtcgctggcctgcatgtacacgaggaaatcagtcttcttcactgaagaagcg
ggaactgctgctagtcttgaggagagcaggcagtttctgttgttccacgagctgtcggag
ttgatgcaggcgctgccaggttttctgatgctgctgactggagaagggaagctcctgtac
atgtcagacagcgtctccgagcacctcggacactccatggtggatcttgtggcacaggga
gacagtgtgtatgatatcatcgacgcctcagatcatcttatcatgaggaccaacctgtca
gcgtctacatcacctgagatagaccgtctcttccgctgtcgtttcaacacctctaagtct
gtgcggaggcagagtgctgggaacaagctggttctgatccgagctcgctgcctgccaccc
cccaccacctctcctgctgtcgggtcctactggacatccaacactgtgtgggtgtgtttc
tgctcccctctggagccccacccatcccgctctggccccgggacagagagggacatgacc
tccagccctcctcaggccgaggccaacttgtttctgtcctgcttctactcccatcatggc
cgggacatgaggctggagacagcacaggacagtgtaagcacctatcttggctttgatgtg
acagctttacgcgctcgctcctggtacagcctcctccacccacaggatctgtcacatgcc
tccgctcagcaccgcagcctattgagagaaggaggagagggcagagctgagatggtggtt
cgtgtgcaagctcaggaccagtcgtgggtttggctttacatggttctacagctgcagcct
ggagaaattcctatcagcagcaacaactacatcatcagtgagtctgaggcctggtcagta
cgtcagcagctcacctcagagcagacccagctgaccctggtcctgaccactggtacctct
cagcaagagggtctgagcatgcagtccccagaaaccctgtccagcccagaccaggtcttc
accccaggcagcagcggtctgtcggcccagtcctttgactttagcaccgctggctgcagc
gtaggctcctctgacgaccccgggagctccactgctgaggccatgcaggtggaaggcgac
ccccgctccagtatctcctctatggaggaagacagcttctttcagcagcatcccgctgaa
aacccctcagctgcttcctcccccaccccagtcaccgttgaaacagtggcagacttagac
tttttaacccagaacattctcctgccgccgtccttccagctcaaccctccgctgccagtt
ctccccctgcccctcccacctgtccccacctcacaagctcaacagactaaagagtttgtg
tgcaccccaccctacaccccccttattagtggggctaacttcccattcagtgaacccctc
ttcagcttcgaccccaccggcactaccacacctccgccctctactacaacagcctctgcc
accacctccttggccccctcagcatcctccaccacccaaccaactactgcctccagcccc
gctccccccacaaccctctcttccaagctttccctcactctaccaaccctcaccactgat
ctcctcttccccgtcgagccctgcagcggctccctctatgagaaactgccccccacaccc
gacagccccggagatgacgactgcacagtgatgaccctacccgaggtacggggtccactg
tatgtagatgtaccaatggggcccctccagtgcccccctgagggccttctcacaccagag
gcatcacctggcaaacagccctgcctctccttcttctccctggagagagagagggagaag
gagagggcagagatctctctcttagctcagcatatcagctcattggcagagggattctac
ctggatccactcttgtccaaactctctcctccttccatgtcaccctcatcctcccctccc
tcccccttcctgtcccccaacatggaaacccctgaggttgaatcagtccacatgcagagg
gagttttatcccatcaaagcgtggagaggtctggacattcccatgttcctagatgaagat
gactctctgtttgaagagagcatcctacaaaccctgctccaagacgacttcgctcctcct
cagacacccgtcccctccttcccctccccatgcacctctcctatgctaaacccctccagc
ccaggttctcctcaaatcccagtgtgctggcaccaaccctcccagtttgagggagtgggc
cacttctgtagcgtccaatcggcgcaatgtaactccatggatgtgtgcggggcgacagag
gcttctgaggctgggatgatggcggaaggggaggggctagcggaggaagcaatggagatc
gaggtggtgtcatctcctgtgtcctgttgctcctccatcccagcttcccctcccctcatt
ctcaccgcctcccccagcccctccacctccatgcccatcggctcgcccacgcccgccgtg
tcttgcactcagtccctcctggaggaactggccgtcctggaacccatgtttggggcaggt
gcctcgatcgcccctggcttagggcaacaacctgagttgtatcaactccaatgtcatcca
tcgccacagtgcttccacaaagatgggagtggaagtgttcctccgttctaa
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