Hippoglossus stenolepis (Pacific halibut): 118112379
Help
Entry
118112379 CDS
T08308
Symbol
si:dkey-237h12.3
Name
(RefSeq) teneurin-3 isoform X1
KO
K24473
teneurin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118112379 (si:dkey-237h12.3)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
118112379 (si:dkey-237h12.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
Ten_N
EGF_TEN
EGF_Teneurin
GBD_Tenm3
Teneurin_ABD
FN-plug_TEN1-4
TTR_TEN1-4
Tox-GHH
RHS_repeat
EGF_2
NHL
EGF
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
118112379
NCBI-ProteinID:
XP_035017530
LinkDB
All DBs
Position
7:complement(22791453..22944554)
Genome browser
AA seq
2730 aa
AA seq
DB search
MERVREQRPFCSLSKSQRDRERDCARDQDRERRYTASSSDREEGACRVPTQKSYSSSETL
QAFDHDPTRMLFGGRVKEMVHKESVEYSRPGQTFSLRQLGICEPSARRGLALCPETGLSH
PLSSYSRGPVATENHEPVSPERTMTLWGTGAKSGQNSCLSSRSNSALTLTDTEMDNKSDN
EMGDHLSSPQGPPPLPPAPPPHKQHPSITSLSRSSLANQRSPSPPPTAGLAADLQSTAEC
VQLQDSWVLGSNVALESRHFLFKTGTGTTPFFGAAAPGYTMATGAVYSTPARPLPRNSLS
RGAFKFKKSPKHCSWKCTAMIAVGIAAVLSIILCYCIAMHLFGLNWQLQELDNQPAFENG
GAGKTGPTQSSVVTALAADGRTTVLLQENNSIDTGQVDIGKRAGQSVPPGVFWRSQVSMD
QPRFLKFNISVQKNALIGVYGRKGLAPTHTQYDFVELLDGSRLIAKEHRSLSELDTRARL
DHPVSVHQAGFIQYLDSGVWHLAFYNDGRSVEAVSYNTIIQESVMECTHNCYGNGECVAG
ACHCFPGFIGPYCSRASCPILCSGNGQYTRGRCQCYSGWKGTECDVPSSQCIDPQCGGHG
LCAAGSCVCNTGHKGFNCEQVDCVDPACSGHGACHHGECHCNPGWGGISCEILKSTCPEQ
CSSHGTFNTDSGTCVCEANWTGADCSIEVCVVDCGPHGSCISGMCHCEEGWTGPECEQRD
CHPRCIDHGVCREGKCDCHQGWTGEHCTIALDSRVSGAVKIGYKDGCPGLCNNNGRCVLD
QNVWHCICQSGWRGLGCDVATETLCSDGKDNEGDGLVDCMDPDCCAQISCQGQTYCRGSP
DPTTVAGQGQSSSGQPTSKGFYDRVSFLIGPSGSHVIPWDNPFNGSLASVIRGQVLTGDG
TPLIGVNVSFLHYPEFGYTVTRQDGMFDLLANGGASLTLSYERAPFPTLHRTVWLPWNVF
HVMDTVVMKREENDIPSCYLTGLFRPHPLILATPLSTLYKTSPEDSPIIPETQVLHEQVA
IPGSDLNLVYLSSRAAGYKPILKVLLTPERLPFGLMKVHLMVAVMGRQFQKSFPAFPDLS
YTFIWDKTDAYNQKVFGLAEAVVSVGYEYESCLDVVLWEKRTAMLQGFELDAANMGGWML
DKHHILDIQNGILYKGSGENQFISLQPPVISTVMGNGRRRSISCPSCNGQAQGNKLLAPV
ALAWGIDGSLYVGDFNYIRRIYPSGNVTSIMELRNKDFRHSNNPAHRYYLATHPVTGQLY
VSDTNSRRIYRPKILTGTKDLQANAEVVAGTGEHCLPFDENHCGDGGKAPEAFLTGPKGI
AVDKNGLIYFVDGTTIRKVDQNGILSTFLGSNDLTSARPLTCDNSMDINQVILEWPTDLA
VSPMDNSLYVLDNNIVLRITENGQVSIAAGRPVHCPLAGMDRGVAGGQRAQLTPLESAVS
IAISFHGAIYIAETDERKMSRIRKVSVDGEITHLAGAPSDCDCKNDANCDCYQTGDGYAK
DARLNAPSSLVAAPDGTLYVADLGNIRIRAVSRNGPTLTAGTYEVASPDAQELYAFDSNG
THQHTASLLTGDLKFTFSYSTENDITAVTDSSGNTLRIRRDPNRMPVRIVAPDNQVIWLS
MGTNSRLKTLTTQGQELVLLTYHGNNGLLATKTSEIGWTTFYDYDSEGRLMNVTFPTGMV
NNLYTDIYSALTVDIESSMSEEEISITTNTSTIRAFYTLAQDQCRSSYQVGFDNSLRITY
ANGMDTHYQTEPHILAGAANPTVARRNMSLPGESGQNLVEWRFRKEQARGKVIVFGRKLR
VNGRNILSVDYDRTLRTEKIYDDHRKFLLKIIYDTAGHPVLWVPSSKLLPVNVSRTSSGQ
ISALQRGPTTERLEYDSQGRLVSRVFADGKIWSYTYLEQSMVLLLHSQRQYIFDFDSLDR
LSAVTMPSVARYTMQTIRSVGYYRNLYHPPESNASVAVDYSEDGLLMRVAHLGTGRRVLY
RYRRQNKLSEILYDSTRVSFTYDEMAGVLKTVNLQNEGFICSIRYRQVGPLVDRQIFRFS
EDGMVNARFDYTYDSSLRVTSVQGVINETPLPIDLYQFDDISGKIEQFGKFGVIYYDINQ
IISTAVMTYTKHFDAHGRIKEIQYEIFRSLMYWITFQYDDVGRVTKREIKIGPFANTTKY
SYEYDVDGQLQTVYLNDKVMWRYTYDLNGNLHLLNAGNSARLLPLRYDLRDRITRLGDIQ
YRMDEDGFLRQRGAEIFEYNSKGSLVRVYSKSAGWTIQYRYDGLSRRVSTKTSLGQHLQY
FYADLSYPARITHVYNHSSSEITSLYYDLQGHLFAMEISSGEEFYIACDNTGTPLAVFTS
NGLLVKQLQYTAYGEVYFDSNPDFQLVLGFHGGLYDPLTKLLHFGEQDYDIMSGRWTLPD
VSTWKKVSKDPAPFNLYMFRNNNPISKVHEVREYVADVNSWLVTFGFHLHNTIPGFPVPK
FDLSMPSYELRKSQLWDDLPSISGVQQEVTRQAHSLLSFERLPEVHLSRGRRGEKSWLWF
SAAMSPIGRAVMFAIYKGSIHTHTLNVASEDCIKVATILNNAFYLEDLHFTIEGRDTHYF
VKPGLPDADLAAMHLTSGHKTLENGVNVTVSQSTTVMDSRTRRFADVEIRAGALALHIRY
GSTVDEEKARVVELARQRALAGAWSREQQRVREGEEGVRPWTEGEKRQLLSSGKVLGFDG
YYVLSIEQYPELADSANNIHFLRQSEIGKR
NT seq
8193 nt
NT seq
+upstream
nt +downstream
nt
atggaacgggtgagggagcagcggcctttctgctcgctgtccaagagccagagagacagg
gagcgggactgcgcgagagaccaggatcgggagcgccgctacaccgcctcctcttctgac
cgggaggagggagcctgccgcgtgcccactcagaaatcgtacagctccagcgagacgctc
caggcctttgaccatgaccccacgcgaatgctgttcggaggcagagtcaaggagatggtc
cacaaggaaagcgtggagtacagcaggccagggcagacattttcgctgaggcaactcggg
atctgtgagccatcagctcgcagaggcttggcgctctgccccgagacgggcctctcccac
ccgctcagcagctactccagaggacccgtcgctacagaaaaccatgaacctgtatcaccg
gaacgtaccatgactctttggggaacgggggcaaagtctgggcagaactcatgcctctcc
agccgctctaactcggcgctgacgctcactgacacggaaatggacaataaatcggacaat
gagatgggggatcatctttccagtccgcaaggccctccacctctgccaccagccccaccc
ccacacaagcagcacccgtccatcacgtccctgagccgcagctcactggccaatcagagg
agcccgagccctccgcccacagccggcctggcggccgacttgcagagtacggcagaatgc
gtccagctgcaggacagctgggtcctgggcagcaatgtggccctggagagcaggcatttt
ctttttaagacgggcacaggaacgacgcctttcttcggtgcggcagcccccggctacacc
atggcgacgggggccgtctactccacgccggcgcgcccgttgcccaggaacagcctgtcc
agaggggccttcaagttcaagaagtcgccgaaacactgctcgtggaagtgcaccgcaatg
atcgctgtgggcatagctgcggtgctgtcgatcattctctgctactgcatagcgatgcac
cttttcggcctcaattggcagctgcaagagttggacaaccagccggcttttgaaaacgga
ggagctgggaagacagggcccactcagtcgagcgtagtgacagctctggctgctgacgga
aggactaccgtgctgctccaggagaacaactccatcgatacgggacaggtcgacatcggg
aagagggcggggcagagcgtcccaccgggggtgttctggcgttcccaagtcagcatggac
cagccgcgcttcctcaagttcaacatctcggtgcagaagaacgcgctgatcggagtctac
ggacgaaagggtctcgctccgactcacacgcagtacgactttgtggagctgttggacggc
agccggctcatcgccaaagagcatcggagtctgagcgaactggacacgagggcgcggctg
gatcatccggtcagcgtccaccaggccggattcatccagtacctggactcgggcgtgtgg
cacctggcgttttataacgacggacgcagcgtggaggcggtgtcctacaacaccatcatc
caggagtctgtcatggagtgcacgcacaactgctacgggaacggagagtgtgtggcggga
gcgtgtcactgcttcccaggattcattgggccgtactgctccagagcctcctgtcccatc
ctgtgcagcgggaacggccagtacaccagggggcgctgccagtgctacagcggctggaag
ggcaccgagtgtgacgttccctcctcccagtgcatcgatccacagtgtggggggcacggc
ctgtgcgcggcgggcagctgtgtgtgcaacacgggccacaagggattcaactgtgaacaa
gtggactgtgtggacccggcgtgctccggtcacggagcctgtcatcacggtgagtgccac
tgtaacccgggctggggcggcatcagctgcgagatcctgaagagcacttgtcctgagcag
tgctccagtcacggcaccttcaacaccgactcggggacctgcgtctgcgaggccaactgg
acgggcgccgactgctccatagaggtgtgtgtggtggactgtggtccccacggctcatgc
atcagcgggatgtgtcactgcgaggaaggctggacaggaccagaatgtgagcagagggac
tgtcacccacgctgcatcgaccacggagtctgccgagagggcaagtgtgactgccaccag
ggctggacgggtgaacactgcaccatcgccctggattccagagtatcaggagcagtcaag
ataggatataaagacggctgccccgggctgtgcaacaacaacggaaggtgcgtcctggat
cagaatgtctggcactgcatctgtcagtcaggatggcgagggctgggatgcgatgtagcg
accgaaacgctctgctcagatggcaaggataacgagggagacggcctcgtcgactgcatg
gacccggactgctgcgctcagatctcctgccagggtcagacctactgccgcggctcgcct
gaccccaccaccgtcgcgggccagggccagagttcatccggccagcccacctccaagggc
ttctacgaccgcgtcagctttctgattggtcccagcggcagtcacgtgataccctgggac
aacccgttcaacggcagcctggcatcagtcatccggggtcaggtcctcaccggagacggg
acgccgctgattggagtcaacgtgtctttcctgcactacccggagttcggctacaccgtc
acgcggcaagatggcatgttcgacctcttggccaacggcggcgcttctttgacgctgagt
tacgagcgcgcaccgttccccacgctgcaccgcaccgtgtggctgccctggaacgttttc
cacgtgatggacacggtggtgatgaagcgggaagagaacgacatccccagctgctacctg
actggcttgttcagaccccacccgctcatcctagccacgcccctctccaccttgtacaag
acgtccccagaggacagtcccatcatccccgagacgcaggtcctccacgagcaagtggcc
ataccaggcagtgacctcaacctggtctacctgagctccagggcagctggctacaagccc
atcctcaaggtgctcctgaccccggagcgtctcccctttggcctgatgaaggtccacctg
atggtggccgtcatgggccgtcagttccagaagtcgttccctgcgttccccgacctctcc
tacaccttcatctgggataaaacagacgcctacaaccagaaggtctttggcctggcagag
gctgtggtgtcggtgggatatgaatacgagtcctgccttgatgtggtgctctgggagaag
aggacggcgatgctgcaaggctttgaactggatgccgccaacatgggagggtggatgttg
gacaaacaccacatattggacattcagaacggtattctgtacaaaggcagcggggagaac
cagttcatctccctgcagccccctgtgatctccaccgtcatggggaacgggcggcgccgg
agcatctcgtgccccagctgtaatggacaggcccaaggcaacaagctgttggcgccggtg
gctctggcgtggggcatcgatgggagcctgtatgtcggcgatttcaactacatccgccgc
atctacccatcgggcaatgtcacaagtatcatggagctcagaaataaagactttagacac
agtaacaacccagcgcaccggtattacctggcaacccacccagtgactggccagctgtac
gtgtcggacaccaactcccggaggatctaccgaccgaaaatcttgacggggaccaaggat
ctgcaggcgaatgcagaggtggtggcaggaaccggggagcactgcctgcccttcgacgag
aaccactgtggcgacggaggcaaagctccagaggcgtttctcactggacccaaaggcatc
gccgtggacaagaacggcctgatttactttgtcgacggcaccacgatccgaaaggtggac
cagaacggcatcctctccactttcctcggctccaacgacctgacgtcggctcgccccctg
acctgtgacaacagcatggacatcaatcaggtgattttggagtggcccacagacctggcg
gtcagccccatggacaactccctgtatgtcctggacaacaacatagtgctgcgcatcaca
gagaacggtcaagtgagcatcgcagctgggcgccctgtccactgcccgttggccggcatg
gaccgcggagtggccggcggtcagagggcgcagttaacccctctagaatccgctgtttcc
atcgccatatctttccacggcgccatctacatagccgagacagatgagagaaagatgagc
aggatccggaaggtttctgtggatggcgagataacgcacttggccggagctccctccgac
tgcgactgcaagaacgatgccaactgcgactgttaccagacaggggacggctatgccaaa
gatgccaggctcaatgccccgtcctctttagtggcggctccagatggaaccctttacgtg
gcagacctgggcaacatccgcatccgggccgtgagcagaaacgggccaactttgactgcc
ggaacatacgaggtggcttcccccgacgcccaggagctgtacgcgttcgacagcaatggc
acccaccagcacacggcgagcctgctcaccggagacttgaagttcacgttcagctacagc
acggagaacgacatcacagctgttaccgacagcagcggaaacaccctgagaatccgcaga
gatcctaaccgcatgccggtgcgtatcgttgcccctgacaaccaggtgatttggctctcc
atgggcaccaatagcaggctgaaaactctcacgacgcagggacaggagctggttcttctc
acctaccatggtaacaacggcctgctggctacaaagacatcagagattggctggacgact
ttctatgactacgacagtgaagggcggctcatgaacgtgacgttccccaccggaatggtg
aataacttgtacacggacatatacagcgcgttgacggtggacatcgagagctccatgtcg
gaggaggagatcagcatcaccaccaacacctccaccatccgtgccttctacactctggct
caggatcagtgtaggagcagctatcaggtcggctttgacaactcgttgaggatcacctac
gccaacgggatggacacccactaccagaccgagccccacatcctggcgggcgctgccaac
ccgactgtggccagacgcaacatgagcctgccaggggagagtgggcagaacttggttgag
tggcgcttccgcaaagaacaagccagagggaaagttatcgtgtttggacgcaagctccgg
gtgaatggacgaaacattctctcagtcgactacgatcgcaccctgaggactgagaagatt
tacgatgaccacaggaagttcctcttaaagattatatacgacacagcgggacacccggtg
ctctgggtgcccagcagcaagctcctgccggtgaacgtgagccgaacgagcagcggccaa
atcagtgccctgcagagaggtcccaccactgagcggctggagtacgatagccagggccgc
ctggtttcccgggtgtttgctgatgggaagatatggagttacacctacctagagcagtcc
atggtgctcctgctccacagtcagcgccagtacatatttgatttcgactctctcgaccgg
ctttctgctgtcaccatgccaagtgtggcccgctacaccatgcagacgatccgctcagtg
ggctactacaggaacctgtatcaccccccagagagcaacgcctcagtggctgtggactac
agcgaagacggcctcctgatgagagtggcccacctcggcacgggacgcagggtcctgtac
aggtatcgcaggcagaataaactgtcagagatcctgtacgacagcacgagggtcagcttc
acctacgacgaaatggcgggcgtgctgaagaccgtcaatttgcaaaatgaaggcttcatc
tgctccattcgttatcggcaagtcggtcccctggtggacaggcagattttccgcttcagt
gaggacggcatggtcaacgcgcgcttcgattacacgtacgacagcagtctgcgtgtcacc
agcgtgcaaggcgtcatcaacgaaacgcccctgcccatcgatctataccagtttgacgac
atctcggggaagattgagcagtttgggaagttcggggtgatctactatgacataaatcag
atcatctccacggcagtcatgacctacacgaagcacttcgatgcacacggacgcatcaag
gagatccagtacgagatctttcgctcactcatgtactggatcactttccagtatgatgac
gtcggccgagtcaccaagcgggagatcaagattggtccctttgcaaacaccaccaagtac
agctatgagtatgacgtggatggacagctccagactgtgtacctgaacgacaaagtcatg
tggcgctacacgtatgaccttaatggaaatctgcacctgttgaatgcagggaacagcgcc
agacttctgcctctgcgctacgacctgagggaccgcatcacccgtctcggagatattcaa
tacagaatggatgaagacggtttcctccgtcagagaggagcagaaatatttgagtacaac
tccaaaggaagcttggtgcgggtctatagcaagagcgccggctggacaattcagtatcgc
tacgacggactcagccgcagagtatccaccaaaaccagcttgggccaacacctgcagtac
ttctacgcagaccttagctacccggccaggattacacacgtatacaaccattccagctca
gagatcacctcgctctattacgacctccaaggccacctgtttgctatggagatcagcagc
ggggaggagttctacatcgcctgtgataacaccggcacacctctggctgtcttcaccagc
aatggactcctggtcaaacagctgcagtacacggcgtacggtgaggtctacttcgactct
aaccccgacttccagcttgtgctcgggtttcacggaggactgtacgaccccctgaccaag
ctgctgcactttggggagcaggactacgatataatgtcgggaaggtggacgcttccagat
gtatctacttggaaaaaagttagcaaagatcctgctccttttaatttatacatgttcaga
aataacaaccccatcagcaaggtccatgaagtgcgagagtatgtggcagatgtgaacagc
tggctggtaacctttggctttcatcttcacaacaccattcctgggtttccagtgccgaaa
tttgatttaagcatgccatcctatgaactgaggaagagtcagctgtgggatgatctgccg
tctatctctggggtccagcaggaagtaaccagacaagcgcactctctcttgtcattcgag
cggctgccggaggtccatctcagccgaggtcgcagaggtgaaaagtcttggctatggttc
tctgcggcgatgtctcccatcggaagagcagtcatgtttgccatttacaagggcagcatc
cacacccacacactcaacgtagcgagtgaggactgtatcaaggttgcgacgatcctcaac
aacgcgttctatctggaagacctccacttcaccatagaaggacgggacacgcactacttt
gtcaagccgggccttccagatgccgaccttgccgcgatgcacctcactagtgggcacaag
actctagagaacggcgtcaatgtaaccgtttcccagtccaccacagtcatggatagtcgg
actcgccgttttgcagatgtggagattcgtgctggggctctagctctccacatccgatat
ggatccacggtggacgaggagaaagcgcgggttgttgagctcgctcgtcagcgcgccctc
gcgggagcgtggtcgagggagcagcagcgggtgcgagagggcgaggaaggggtccgcccc
tggacagagggagagaagaggcagcttctgagcagtggaaaagtgctggggttcgatggg
tactatgtgctctctatcgagcagtacccagaattagcagacagtgctaataacattcac
tttcttcggcaaagtgaaattgggaaaaggtaa
DBGET
integrated database retrieval system
