Hippoglossus stenolepis (Pacific halibut): 118112384
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Entry
118112384 CDS
T08308
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118112384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118112384
Spliceosome [BR:
hsp03041
]
Complex C
Other components
Step II factors
118112384
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
118112384
NCBI-ProteinID:
XP_047196523
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Position
7:12851395..12856844
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AA seq
478 aa
AA seq
DB search
MTREDCRIKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRP
QEEEEVPYSNIGEWYKRGVQENAVTTKFRKGACENCGALTHNKKDCFERPRKVGARFTGS
GIAPDEHSQVQLDLDYDGKRDRWNGYDPEDHHRIVEEYAKVDLAKRTLKAQKIQDELASG
KLDQTHGEHDSEDEDEDKYADDIDMPGQNFDSKRRITVRNLRIREDTAKYLRNLDPNSAY
YDPKTRAMRENPYSNTGMNPDEVGYAGDNFARYSGATITMAQTQLFAWEAYERGSEVHLQ
ADPTKLELLHLSFKDKKEDFKEQQRESILEKYGGQEHLDAPPRELLLAQTEDYVEYSRHG
AVLKGLEKAVVRSKYEEDVIINNHMCIWGSYWKDGYWGYKCCHSMVKQSYCTGETGITVA
LEAEAKHRKHIDAIMQIDERKRPYTSLQEVKAPTEEELEAFRMKRCRSDDPMVSFLEK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccagggaggactgcaggataaagaaggagctggaggagcagagaaagctgggaaac
gctccagctgaggtggacgaggagggaaaggacattaaccctcacatcccacagtacatt
tcatcagtgccatggtacatcgacccgtctaaaaggcccactttaaagcatcagagacca
caggaagaagaagaagtgccgtactcaaacattggagagtggtataagagaggagtgcag
gagaatgctgtgaccactaaatttcgtaaaggagcttgtgaaaactgtggtgccctgacg
cataacaagaaagactgctttgagcgtcccagaaaagttggggcgaggttcacgggctca
ggaatagctccagatgaacactctcaggtccagcttgatttggactacgatgggaagagg
gatcgctggaatggttacgaccccgaagaccaccatcgcattgtggaagagtacgccaaa
gtagacctggccaaaaggactctgaaggcacagaaaattcaggacgagttggcgtctgga
aaactggaccaaactcatggggaacatgacagcgaagatgaggatgaagataaatatgca
gatgacattgacatgcctggtcagaactttgactccaaaagaagaattactgtcaggaat
ctgcgtatcagagaagacacagctaaatacctgaggaatctggatccaaactccgcctac
tatgatccaaagactcgagctatgagagagaacccgtactccaacactggcatgaaccct
gatgaggtggggtatgctggagacaactttgctcgctacagtggggccacaatcaccatg
gctcaaacgcaattgtttgcctgggaggcctacgagagaggatcggaggttcatctgcag
gccgaccccaccaagctggagcttctccacctgtccttcaaagacaaaaaagaggacttt
aaggagcaacagcgggagagcatcttggagaagtatggaggtcaagaacacttggacgct
ccaccacgggagctgctgttggcccagacagaggactacgtggagtactctcgtcacggc
gctgtcctgaaaggactagagaaggctgtcgtccgctccaagtacgaggaggacgtgata
atcaacaaccacatgtgtatttggggctcttactggaaggacggctactggggctacaag
tgttgtcactccatggtcaaacagagttactgcacaggagagactggaattactgtagcc
ctcgaagcagaggccaaacacagaaagcacatagatgcaataatgcagatagatgagagg
aagaggccgtacaccagcctgcaggaagtgaaggcgcccaccgaggaggagctggaggcc
ttccgcatgaagcgctgccggtcagatgatcccatggtatccttccttgaaaagtga
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