KEGG   Hippoglossus stenolepis (Pacific halibut): 118112466
Entry
118112466         CDS       T08308                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5 homolog
  KO
K10846  DNA excision repair protein ERCC-5
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    118112466 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118112466 (ercc5)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118112466 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 118112466
NCBI-ProteinID: XP_035017691
LinkDB
Position
1:complement(10631834..10641623)
AA seq 1154 aa
MGVHGLWRLLESSGKPINPETLDGKILAVDISIWLNQAVKGVRDRDGNSVQNAHLLTLFH
RVCKLLFFRIRPVFVFDGDAPLLKRQTLALRRQRKEELSRESKQTNEKLLKTFLKRQAIK
AALGDRSQDPLPSLSTVKRPEVDDMYVLPALPPAEEKDESGSEARQSSDEEEDKELEGSD
SYHMYQGDLPGDPNSVDINSEEFAILPPEMKHEILKDMKEFSKRRRTLYQQPPEGSGDFS
QYQLSGLLQRNKLNQRLEGVEKEMNERSAGSAPQLCQQDGQSHSVEARRLVSEDNSHYIL
IKGSKKSKTATESKTATESQPATAPWSGSSLTGCRRRPADRPEPLWRPVCEGEEDKSSPS
KEDFKRSASEPPQGDTSPPSPRTLEAIQAAMNDSSDEETVGRGKKDGSLSPRTLLAIQNV
LVEEEDSGAEQRNVSVNLQKTIHRPVPQLVISSSEEETEPLDVKCLLTSTDSRENPTGRS
PHVKDSLLVSSSEDEMKDVIGQSNKALHTAVLPQPHRKEMRSEEEMKAGELKEDVTTGSG
GQIEKKDDLVQTHAAAASSQNTSSINLSAQRCGKPLSAETQPVLSEQRRNVSAETLEESD
EDDVKSEGGEGSESEESFMEVSEEEFKEEDEDDSIVEIREMERPADVHEDETKKKEEPEE
SSTEAQAAALKSDEDKQRQDEEDERKETEASSNPVVNEWNHMDMEELEALESSLQVEQSS
LREQKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPMEAEAQCAELDRAEQTHGTITD
DSDVWLFGGRHVYKNFFSQNKYVEHYQCSDLQNQLGLDRTKLINLAYLLGSDYTEGVPGV
GYVTGMEILNEFPGPGLDPLTQFSQWWSEAQEKKRLVANPRDTKVKKKLRDLKLRPGFPN
PAVAQAYLQPAVDHSDGSFSWGRPQIDVIKEFCLNRFGWSSRKTEETLQPMIKQLNTQQT
QLRIDSFFRMEQQEKQAIRSQRLRRAVTCLKRKEKGEGAEESEEEMPSPIKSKRGKEASK
NSKKGGGEKETERAVAGGGFLGSEVTDESPHTSLKDVSSVNHESKDVSSVNHESKDVSSI
NHESISVKSVPQSTKTPPRKVRSSSSSSGEDSDGVGEVTMVTARSVFEGSARGRNAKNTR
GRGKGRGKKMRGKN
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgggggtgcacggactgtggaggctgctggagagctcagggaagcccatcaacccggag
accctggacgggaagatcctcgctgtcgacatcagcatatggctgaaccaggccgtgaag
ggggtgagggaccgggacggcaacagcgtccagaacgcccacctcctcactctcttccac
cgcgtctgcaagctgctcttctttcgcatccggccagtctttgtgtttgacggggacgca
ccgctgctgaagaggcagactctggctctgaggaggcagaggaaggaggagttgagccga
gagtccaaacagaccaatgagaaactgctcaagacgttcctcaagagacaagctatcaaa
gctgcacttggagaccgcagtcaggatcctctccccagcctctccactgtgaagagacct
gaggtggacgacatgtatgttcttccagccctcccacctgcagaggagaaggacgaaagc
ggatcagaggccaggcaaagttcagatgaggaggaagataaagagttggaggggagtgac
agttatcacatgtatcagggcgatctgcctggagaccccaactcagtggacatcaactca
gaggagtttgccatcctgcctcctgagatgaaacacgagatcctcaaagacatgaaggag
ttttccaaacgacgccgcaccctgtaccagcaacctccagagggctcaggtgacttttct
cagtaccagttgtccggcctgctgcagaggaacaagctgaaccagcgtctggagggagtg
gagaaagagatgaacgagcggagcgccggcagcgctccacagctctgccaacaggacggg
cagagtcacagcgtggaggcacgtcgactggtttcagaagacaattcccactatatcctc
attaaaggctccaaaaagagtaaaactgccacagagagcaaaactgccacagagagccaa
cctgccactgcaccctggtctggcagctccctgacgggctgcagaagacgaccagccgac
agacccgagcccctgtggcgtcctgtttgtgagggagaggaagacaagtcgagtccctcc
aaagaagacttcaaacgctcagcatcagaaccccctcagggggacacatcgccaccctcc
cctcgcacactcgaggcgatccaggccgcaatgaacgacagctcagatgaggagacggtg
ggacggggtaagaaggatggcagcctgtctccacgtactctgctggcaatccaaaacgtc
ctggttgaggaggaagacagtggagctgaacagagaaacgtatccgtcaacctgcagaag
actattcatcgtcctgtgccacaactggtgatcagcagctcagaggaagagacagaaccc
cttgatgtaaagtgtttattaactagtactgactctagggagaacccgacaggcagaagt
ccacatgtgaaagatagcttgttagttagtagttctgaagacgagatgaaggacgtgatt
ggtcagagtaacaaagcacttcacactgcagtgctgccacaacctcacaggaaagagatg
aggtcagaagaggagatgaaggccggagagctgaaagaggatgtaacgacaggaagtgga
gggcagatagaaaagaaagatgatttggttcaaacgcacgctgctgctgcttccagtcaa
aacacatcatccatcaatctttctgctcagcggtgtggaaaacctctgagtgcagagact
cagcctgttctgtcagagcagagaagaaacgtgtccgctgagactctggaggagagtgat
gaagatgatgtgaagtcagagggcggcgaggggagcgagtcagaagagagcttcatggag
gtctcagaagaagaatttaaagaggaggatgaagatgattcgattgttgaaatcagagag
atggagcgtcctgctgacgtccatgaagatgagaccaagaagaaagaagaaccagaggaa
agttcgacagaggctcaagctgctgctctgaaatcagacgaggacaaacagagacaggat
gaagaggacgagcgaaaagaaacagaggccagctcaaatccagtggtcaacgaatggaat
cacatggatatggaggagctggaggctctggagagctctctgcaggtggagcagagcagc
ctgagggagcagaaacagcagcaggagaggatggcgaacacggtcaccggacagatgtac
ctggagagccaggagctgctgcgactgttcggcgtgcccttcctggtggcgccgatggag
gccgaggctcagtgtgcagagctcgaccgcgccgaacagactcacgggaccatcacggac
gactctgatgtgtggctgttcggagggcggcacgtgtacaaaaacttcttcagccagaac
aaatacgtggaacattaccagtgcagtgatctgcagaaccaactgggtctggacaggacc
aagctgataaacctggcgtacctgcttggaagtgactacacagagggcgtgccgggggtc
gggtacgtgaccggcatggagatactgaatgagttcccaggaccggggttggatccgcta
acacagttcagtcagtggtggtcagaggctcaggagaaaaagcgcctggtggctaatccg
cgggacacaaaggtgaagaagaagttgagggatctaaaactgcggcctgggttcccaaac
ccggcggtggctcaggcgtatctgcagcccgctgtggaccactcagacggctccttcagc
tggggacgcccccagatcgacgtgattaaagagttctgtctgaatcgctttggttggagc
agtcggaaaacagaggagactcttcagcctatgatcaagcagctcaacacgcagcagact
cagctgcggatcgactctttcttccgcatggagcaacaagaaaaacaggcgatccgcagc
cagcgactccggcgagcggtcacctgcctaaagaggaaggagaagggggaaggagcggag
gagagtgaggaggagatgccttccccaatcaaatccaagagagggaaggaagcaagcaag
aattcaaagaaaggaggaggagagaaggaaacggagagagccgtggcaggaggagggttt
ctggggtcagaggtgactgatgaatctcctcatacgtctctcaaggacgtgagcagcgtc
aaccacgagtccaaggacgtgagcagcgtcaaccacgagtccaaggacgtgagcagcatc
aaccacgagtccatctcagtaaagtctgtccctcagtctactaagactccacctcggaag
gtcaggagcagcagcagcagctctggcgaggacagcgatggtgttggcgaggtcactatg
gttacagcccgatctgtctttgaaggcagcgcacgagggcgcaacgcgaaaaacacgaga
gggagagggaagggaagaggaaagaaaatgcgaggaaaaaactga

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