Hippoglossus stenolepis (Pacific halibut): 118112477
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Entry
118112477 CDS
T08308
Symbol
ebf1a
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118112477 (ebf1a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
118112477 (ebf1a)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
118112477
NCBI-ProteinID:
XP_035017704
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Position
7:10050024..10109024
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AA seq
599 aa
AA seq
DB search
MFGIHESIQRSGSSMKEEPMVAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTTYIDFVEKDKETTGEKTNNGIHYRLQLLYSNGI
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVEGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHATPSIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDQERLPKEVILKRAADLVEALYGMPHNNQEMILKRAADIAEALYTTVPRGHN
QLSSLGSGSVHAGMMSVNSFTGSEVAQTGNQGFSRSTSSVSPHGYVPSSTPQQNSYSSVS
NSMNGYANSGMATLGTSPNFLNGSAGNSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSP
ANMVSAAVKQKSAFAPVVRPQNSPPPTCTSTNVNSLQDQSFVDSSKYSSASSLQGLAFS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcatccacgagagcatccagaggagtgggagtagtatgaaagaggagcccatg
gtggccgggatgaacgcggtccggacatggatgcagggcgccggggtgctggacgccaac
acagccgcgcagagcggagtgggtctcgctcgggcacacttcgagaagcagccgccctcc
aacctgcgcaagtccaacttcttccacttcgtcctggctctgtacgacagacagggtcag
ccggtggagatcgagaggaccacctacatcgacttcgtggagaaggacaaggaaacgacg
ggggaaaagaccaacaatgggatccattatagactccagctcctctacagtaacgggatc
aggacagagcaggacttgtatgttcgtctcattgactccatgactaaacaggcgatcatc
tatgagggccaggataaaaatccagagatgtgtcgggttctgttgacccacgagatcatg
tgcagccgatgctgcgataagaagagttgtggcaacaggaacgagaccccgtcagacccc
gtcatcatcgacaggttcttcctcaagttcttcctgaagtgtaaccagaactgcctgaag
aacgcagggaaccctcgggatatgaggcgttttcaggtggttgtatcgactacggtgagc
gtggagggtcacgtcctggccgtctccgacaacatgtttgtgcacaacaactccaaacac
ggccgccgggcccgaagactggacccctcggaaggaacgccgtcctacctggagcatgca
acccccagcatcaaagccatcagccccagtgaaggctggaccacagggggcgccacagtc
atcatcatcggggacaacttcttcgacggcctgcaggtcatcttcggaaccatgctggtc
tggagtgagctgatcaccccccatgccattcgtgtgcagactccacccagacacatcccc
ggggtggtggaggtcacgctgtcctacaaatccaaacagttctgcaaaggcacacctggg
cgtttcatctacacagcgctgaacgagccaactatagactacggcttccagaggttacag
aaggtcatccccagacaccccggagaccaagagagattacccaaggaggtgatcctaaag
agagcagcggacctggtggaggccttgtatggcatgcctcacaataaccaggagatgatt
ctgaaacgagcggcagatatcgcagaggccctgtacacaacggtgccaagagggcacaac
cagctctccagtcttggcagcggctccgtccatgctggcatgatgtctgtaaactccttc
actgggtcggaggtggcgcaaacaggcaatcagggtttcagtaggagtacaagcagtgtg
tcccctcacggttatgtccccagctccaccccccagcagaatagctacagctctgtctcc
aatagcatgaatggctacgctaactctggcatggcaaccttgggcacctcgcccaacttc
ctcaatggatctgcaggcaactcgccctatgctatcgtcccatcaagccccaccatggcc
tcatcgaccagtctgccctccaactgcagtagctcatccggcatcttctccttctccccg
gccaacatggtgtctgcagccgtcaagcagaagagcgccttcgcccctgtcgttcgaccc
cagaactcccccccgcccacgtgcaccagcactaacgttaacagcctgcaagatcagtct
tttgtggactctagcaagtactcatcagccagctctctgcagggcctggccttctcctga
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