KEGG   Hippoglossus stenolepis (Pacific halibut): 118112479
Entry
118112479         CDS       T08308                                 
Symbol
rack1
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-2-like 1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    118112479 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118112479 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsp04147]
    118112479 (rack1)
Messenger RNA biogenesis [BR:hsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     118112479 (rack1)
Exosome [BR:hsp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118112479 (rack1)
  Exosomal proteins of colorectal cancer cells
   118112479 (rack1)
  Exosomal proteins of bladder cancer cells
   118112479 (rack1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_Gbeta WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st NBCH_WD40 TRM82_WD Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd DSE1_N Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_VPS8 CFAP251_N Beta-prop_DCAF12 Beta-prop_WDR41 ASA1 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR75_2nd Beta-prop_pof12 Tricorn_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 118112479
NCBI-ProteinID: XP_035017711
LinkDB
Position
7:complement(13168439..13172857)
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQYPDMILSASRDKTIIMWKLTRDETNYGIPQRCLK
GHSHFVSDVVISSDGQFALSGAWDSTLRLWDLTTGATTRQFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDEGHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA
NCKLKTNHIGHTGFLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDMINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgaccgtgagggggaccctgaaggggcacagtggatgggtcacccag
atcgccacgacgccccagtatcccgacatgattctgtcggcgtcccgagacaagaccatc
atcatgtggaagctgacccgtgatgaaaccaactatggcatcccccagcgctgcctgaag
ggccactctcactttgtgagcgatgttgtcatctcctcagatggacagttcgccctgtcc
ggtgcctgggactcgaccctccgcttgtgggatctcaccaccggcgccaccactcgccaa
tttgttggacacaccaaggatgttttgagtgtggccttttctgctgataaccgtcagatt
gtgtctggatcccgggacaagaccatcaagctatggaacactcttggagtctgcaaatac
accatccaggatgagggccactctgagtgggtgtcctgtgtgcgattctcccccaacagc
agcaaccccatcattgtctcctgcggctgggacaagctggttaaggtgtggaacctggcc
aactgcaagctgaagaccaaccacattggccacactggcttcctgaacacagtgactgtc
tctcctgatggctccctgtgtgcatctggtggaaaggacggccaggccatgctctgggac
ctgaatgagggcaagcacctgtacaccctggacagtggtgacatgatcaatgccctctgc
ttcagccccaaccgttactggctgtgtgccgccactggcccaagcatcaagatctgggat
ttggagggcaagatcattgtggatgagctgagacaggaagtgatcagcacaaatagcaag
gctgaacccccacagtgtacttccctggcatggtctgctgatggacagaccctgtttgct
ggctacactgacaacctgatcagagtgtggcaggtcactattggaacacgataa

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