Hippoglossus stenolepis (Pacific halibut): 118112499
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Entry
118112499 CDS
T08308
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118112499 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118112499 (uvssa)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
118112499 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Ribosomal_L20
Motif
Other DBs
NCBI-GeneID:
118112499
NCBI-ProteinID:
XP_047196563
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All DBs
Position
7:1067617..1108096
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AA seq
775 aa
AA seq
DB search
MHTTVMELSQRERLSELVEELTTSGQPQLNQDKMKKIKKICKVSNDCIDHLYHLVMAQLN
QDHCEVRLSAFQITSELFSRSHHFRTLLVDNFQEFLDLTVETDLDQPLPPPKEVARKLRS
LAIQTIQLWQASHGTAYKKLALGYHFLKQVKKVDFQDAEARTVAERGREEERQRRMERIY
KERVEAACKDMEESYEGIEATLTEMESCLRLLFPEFGLTDIHSANNSPSGSQRANECPPD
DGQPCCSKDVRDNMKEGAEESREVKNGNGKKEKMSQKEEREPGNEQKEEKKDEIEKVLGE
GEEEEDTEEEEEEGGSSEEEEEKPFDEDLFIRNSGLISHSYSLDLNLSPGFHVKESEDNE
AVVSTVIDLHRLITTKHLPAVQSWVQVFTKAGAGEQLLRRALDLKRSLEAALQKHKELHI
DYKTRVRRVMKASSDGQDEEDDDDDDDDFDEVPEKEGYEPHIPEHLRSEYGLDPTPSTSA
APVTAKLPAKRPSAPAPHSSSHSSTFRRMKRLTEEEQDPTCAAATVRLLRQSLPLSVEPS
SSSSSSGPSSSQSSSDQKAVDAPVVPFGLDLYYWGQEQPNAGKIIKAASQHQFWVPIEVE
EEVENEQLLAESKSRYISFPGSFTPVSHYCRAPLGNGKLCQRQDRLKCPFHGRIIPRDQE
GRPCSREDQVREEQEERRKRTEQPDWRDAELMRDIEAATGEDLGSNRVGKKGKGKGKKKK
FPNLSDLKQSANTSRSRLEKRVFNKSSMRRVAQVMSKADGKKHDKFSNQFNYAFN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccacagtgatggagttgtctcagagggagcggctctccgagctggtggaggag
ctgaccacatcggggcagccacagctcaaccaggacaagatgaagaaaatcaagaagatc
tgcaaagtgtctaatgactgcatcgaccacctgtaccacttagtgatggctcagctcaac
caagaccactgcgaggtgcgactgtcagccttccagatcacctctgagctgttctccaga
tcacaccacttcaggacgctgctggtagacaacttccaggagttcttggacttgacagtg
gagacggacttagaccagcccctccctcctcctaaagaagtagccaggaaactgaggtca
ctggccatccaaaccatccagttatggcaggcctcacatggcacagcttataagaagttg
gcactgggctaccactttctcaaacaggttaagaaggtcgacttccaggatgccgaggcc
aggactgtcgcagagagggggagggaggaggagagacaaaggagaatggagaggatctac
aaggagagagtggaggcagcatgcaaagacatggaggagtcgtacgagggaattgaggca
acactgacagagatggagtcctgtttgaggctacttttccctgagtttggtctcacagac
atccactcagccaacaacagtccttcaggctcccaacgagccaacgaatgcccaccagat
gatggacagccctgctgcagtaaagatgtgagggataacatgaaagaaggggcggaggag
agcagggaagtgaaaaatgggaatggaaagaaggaaaaaatgtctcaaaaagaggagagg
gagcctgggaatgagcagaaggaggagaagaaagacgagattgagaaagtgcttggggag
ggagaggaggaagaagacacggaagaggaggaggaggaggggggaagtagtgaagaagag
gaagagaaaccttttgatgaggacttgtttattcggaactctggactcatttctcactct
tacagtctggacctgaacctcagtccaggttttcatgtaaaggagtccgaggataatgag
gcagtggtttccacagtgatagacctccacagactgataacaaccaaacacctcccagct
gtgcagagctgggtgcaggtgttcactaaggctggtgcgggggaacagcttttaaggaga
gcactggatctgaagagatctttagaagcagcactgcaaaaacacaaagagctccacatc
gactataagaccagggtccgcagagtgatgaaggcctcttcagacggacaggatgaggag
gatgacgatgatgacgatgatgactttgatgaggttccagagaaagagggatatgagcca
cacattccagagcatctaagaagcgagtatggtttggatcccactccttccacctcagca
gcacctgtcacagcaaaacttcctgctaagagaccttcagctccagcccctcattcttcc
tcacactcgtctaccttcaggcgtatgaagcgtctcacagaagaggagcaggatccaacc
tgtgcagctgccacggtgcgcctcctaagacagagccttcctctttctgtggagcccagc
agcagcagctcatcatcaggtcccagttcatctcagtccagttcagaccagaaggctgta
gatgctcctgtggttccatttggtttggacctgtactactggggacaggagcagcccaat
gctggcaagatcatcaaagcggcttctcagcatcagttctgggtgcccattgaggtggag
gaagaggtggagaatgagcagttgctggcagagagcaagagcagatacatctccttccct
ggaagcttcactcctgtcagccattactgtagagctccactgggtaatggaaagctgtgt
cagaggcaggaccggctcaagtgtcctttccatggccgaatcattcctcgagaccaggag
ggtcgaccctgtagccgagaggaccaagtgagggaggagcaggaggagaggaggaagagg
acagagcagcctgactggcgtgatgcagagctgatgcgagacattgaggcagcaacagga
gaagacctgggttcgaacagagtgggtaaaaaagggaaagggaaggggaagaagaagaag
tttcccaacctcagtgatctgaagcagagcgccaacacgtcccgctccagactggagaaa
agagtcttcaacaagagcagcatgcgcagagtggctcaggtgatgagtaaagctgacgga
aaaaaacatgacaagttctccaaccagttcaactatgctttcaactga
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