Hippoglossus stenolepis (Pacific halibut): 118112543
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Entry
118112543 CDS
T08308
Name
(RefSeq) uncharacterized protein LOC118112543
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118112543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118112543
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118112543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
118112543
NCBI-ProteinID:
XP_047196635
LinkDB
All DBs
Position
7:complement(20801284..20814356)
Genome browser
AA seq
1605 aa
AA seq
DB search
MRLRFGFRVRIGFRFSLEAACILPTSDLSSVCVCVCVFLFKLCGIPVCVCGPAAGGGRVV
ITAQQQQQISDGATCLAAAALTRFALSEFADDPRSLELNQGRRADTDLGETPTGPAHVGD
FLQRRLLFLRRADTGARWGGNDPDHRVTRHRDSFTATFPCIGANMMSLIDLDDDQRWVPT
HVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAALPEWSEECCFELLPGIL
EDGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQTIIPLDQIFQEGMCPRDEWFKLNSKAG
RKEKERGELQVTVQFTRNNMTASMFDLTIKDKPRSAFGKLKDRVTGRKRGDVESSSAIVP
GRFAALSGSLGQPFGEGGGGVVVMESRDVAVAEEKRSKVKDFFKGKLRKSSDTRSCSSLA
SDSSLSSMASDNPGPPPSLDLLSDPPSSPIYTSKVRVDAHYGEADLAKKVLTSQHTTKVL
THKRALSDEASKITTALSRSNVAMESLRGQTMTQSKSSLCINGSHVYDSEPSTPKSSGAL
PSKLVLQEKCSPLSRSLQNLTKRSEDKGSFAEGRRWSFDKTRKEEEKEARASFPPTQPAQ
SDGRTTQAAAPTVSSASSSPEKGRKLRKTLFSGGRSESLPAKSDLNQAASSSEGRLRGWF
GSGDSQNKPRLEVSPKVESSSDVPPPLPPLSPAPPQYSSPSGHISPDDRTQSRPLTPSTS
PSSAPISPSNPFLPQMQRNPFFEELLAEESQTSPPLAPCSPSSGLSPFHYTTLPCAPSPA
HDAHATKMASIRRERPRPVGRQISLPALLPKAATPNSHNHASRSMSESAGEWDDFFDALA
SSRLNSPTGSVPQKRLRTSPSFDTCSYAVNNHAQGLQTCEEQPPPLPPRRLLRTTLSEIY
SDGWLHRGQELAVHKEAYLLSQTGVASLQHGREAECKRNGSSPDPQTSSETSDSPSVPSE
QRADATSPGLVPEEKQKKFKYEPLEYDADCWGGMLFEQDLYGRMCRGNYGKLTANNHRLP
LNAEESDGTNITFKISAPEMLLDSEISVKDVMNLPTTTSPGPDVKMDGPSAPVEAVAESK
TNDTTCTNNNVSFLSGDLNMNVNNLDFTFIDSDGSSQSEAVDTLKGVSSLGAISPQQTED
SLTVYHAETAPEDLFTLKDTYIPEMNSSFEINASSKRCKVSPALQDCHWELNNLLPRDQS
RANDSGEIAALSSQNQTSSDLHVEFRDDKTRNNGNSQKTQKDIDDNGNPEAQLASHQQTE
VFSGVVSARFRPKGLSRQSSCSSPSSQSQSGDREFEQLLSLVQNISQVGNGQLLYQPSKS
STDLPVNSTGRPKTSKVNKMSLLTKYCVTGIPSEVSFEDLHAKVAPSSRSPTKPDPSPYS
IPFAPSLSNATTTANDTQAKLHPTPLCCPPIHLSSMGPGAGASTTLVVAPYTSTTSSSFS
TTFATDPPLVDARHSLFPEETQPANNLPRQESRPHPVKPLTSSQSEKKEGRSVLEKLKST
IHPGRGAAHQAAAEAERSQEVPVDNSAQYQHLTNMELISLLLQQEMDMQKQQAASERQEA
QLGKCEGELKKVKAQMRDLEDYIDNLLLRIMEQTPTLLQVRTRHK
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaagatttggtttcagggttagaattgggtttaggtttagtttggaggctgcc
tgcattctgccaaccagtgatctgtccagtgtgtgtgtgtgtgtgtgtgtgtttctcttt
aaactctgcggcatccctgtctgtgtctgcggccctgctgctggaggagggcgggtcgtc
atcaccgctcagcagcagcagcagatttcggacggtgcgacatgtctggctgcagcggct
ctaacccggtttgcactaagtgaatttgcggatgacccgcggagcctcgagctgaaccaa
ggccgccgtgcggacactgacctcggggaaactcccactggacccgcgcacgttggagat
ttcctgcagaggcgccttttgtttttgcgcagagcggacactggcgcacggtgggggggg
aatgatcccgaccatcgagtgacacgacaccgggattctttcactgccacgttcccgtgc
atcggtgcaaacatgatgtcactgatcgacctggacgacgaccagcgctgggtgcccacc
cacgtgaatgtcaccgtgctccgggcgagggggctgcgcaccaagggcaagcacggcagc
cgctacctgtacaccatcatccaggtggggaaggagaagtacaccacggggctggtggag
aaggcggcgctgcccgagtggagcgaggagtgctgcttcgagctgctgcccgggatcctg
gaggacggcggccgtagcgcgtacccgccgggcagcggggacctggtgctcaccgtcatg
caccgggtcctgatcggactggatgtgttcctcggtcaaaccatcatcccgctggaccag
atcttccaggagggcatgtgtcccagagacgaatggttcaagctcaactccaaggcagga
aggaaggagaaggagcgtggtgaacttcaggtgacggtgcagttcacccgcaacaacatg
acagccagtatgttcgacctcaccatcaaggacaaacctcgctctgcctttgggaagctg
aaggatcgcgtcacggggaggaagaggggggatgtggagtcttcctcggccatcgtgccg
ggccgcttcgctgccctgtccggatccctggggcagccgttcggagaggggggcggagga
gtggtggtgatggagtctcgagacgtggcggtagcagaggagaagaggagcaaggtgaag
gatttcttcaaagggaagctgcgcaagtcgtccgacaccaggtcgtgctcatcgctggct
tcagacagcagtttgtcttccatggccagtgacaaccccggccccccacccagtctggat
ctgctgtcggacccccccagctcgcccatctacacaagcaaagtgagagtggacgcccac
tatggagaggcagacttagctaaaaaagttctcaccagtcaacacaccacaaaggttctc
acacacaagcgagccctgagcgacgaagccagcaaaatcacaacggccctctctcgatca
aacgttgcgatggagtctctcaggggtcagaccatgactcagtccaagtcgtccttgtgt
ataaatggaagccacgtctacgactccgagccatcgactccaaagagctcgggagcgctg
ccgtccaagctggtgctgcaggagaagtgctccccgctgtctcgctccctgcagaacctc
accaagaggagcgaggacaaaggctcctttgccgagggccgccgctggtcattcgacaag
acgaggaaagaggaagaaaaggaagctcgggcgtcgtttcctccaactcagccagctcag
tcagacggtcgcaccacgcaggcggcagcgccgaccgtctcctctgcgtccagttcacct
gaaaaagggaggaagctgaggaagacgttgttctctggagggaggagtgagtctcttccc
gccaagtcggacctgaaccaggctgcttcatcatcggaggggaggctcagaggctggttt
ggctccggcgactcccagaacaagccgaggctggaagtttctcctaaggtagaaagcagc
tcagacgtaccccctcccctccctcctctctcccccgctccccctcagtactcctccccc
tctggtcacatctcacccgacgaccgcactcagtctcgcccgctcactccctccacctca
ccctcctcggctcccatctccccctccaaccctttcctcccccaaatgcagcgcaacccc
ttctttgaggagctcctagccgaggagtcgcagacgtcccctcctcttgcaccttgctcc
ccctcctccggcttgtcccccttccattacaccactctgccctgcgcacccagccccgct
cacgatgctcatgctacaaagatggcttccataaggcgggagcgaccccggccggtgggc
agacagatatctctccctgcgttgttacccaaagcagccacaccgaactcccataaccac
gcctctcgctccatgtccgagagcgcaggagagtgggatgacttttttgatgctcttgcc
tcgagcaggctgaactcgcctacaggaagtgttcctcagaaacggctgagaaccagcccg
tcatttgatacatgtagctatgcagttaataatcatgcacaagggctgcagacgtgtgaa
gagcagcctccgcctttgcctccgaggaggttgttaagaactacactcagtgagatttac
tctgacggctggctgcacagaggtcaggagctggccgtccacaaagaggcctacctcctc
tcacagaccggcgtggcctcgctacaacatggacgagaggccgagtgcaaaagaaacggt
tcatctccggaccctcagacgagcagcgagacctccgactcccccagcgttccctccgag
cagcgagcagacgccacgtcaccgggattagtccccgaagagaagcagaaaaagttcaaa
tacgagcctttggaatacgacgctgactgctggggagggatgctgttcgagcaagatctg
tacggacgcatgtgcagaggaaactacggaaaactcacagcgaacaatcatcgtttgcca
ttgaacgctgaggaaagtgatgggactaacatcacgtttaagatctctgcacctgaaatg
cttcttgacagtgaaatctctgtgaaagacgtcatgaacttgccaactacgacttcccca
ggcccagacgtgaagatggatggtccctctgctccggtagaggcggtagcagagtctaaa
acaaacgataccacttgcaccaacaataacgtgtctttcttgtcaggagacctgaacatg
aatgtgaacaacttagacttcacttttattgactctgacggctcctctcaatcagaggcg
gtcgatactctcaaaggcgtcagtagtttaggagccatttccccacaacagacagaagat
tcactgactgtttaccacgcggagacggcacctgaggatttattcactttaaaggacacc
tacatacctgagatgaactcttcgtttgaaataaacgcttccagtaaacggtgcaaagtg
tctccagctctccaggactgccactgggagctgaacaacttgttaccacgtgatcagtcc
agggcaaacgacagcggagagatcgctgcgctgtcgtcgcaaaatcaaacatcatccgat
cttcacgttgaattcagagacgataaaacaagaaacaacggtaattctcagaagactcag
aaggacattgatgataatggtaacccagaagctcagctggcctcacatcagcagaccgag
gtgttttccggagtggtcagcgcacgttttagacccaaaggtttgtcccgacagagcagc
tgcagcagcccgagcagccaaagccaaagtggagacagagagtttgaacagttgttgtct
ctcgttcaaaacatctcacaagtcggtaacggacaattgttgtatcagcccagtaaatct
tccacagatttgccagtaaatagcaccggtcggccgaaaacatcaaaagtcaacaaaatg
tccctcctcaccaagtactgtgtcacaggtattccctctgaggtcagtttcgaagacctc
cacgctaaagtagcaccaagctcaagatcccctactaagcctgatccctctccttactcc
atcccctttgcaccgtccctgtccaacgccaccaccaccgccaatgacacacaggctaag
ctccaccccacccctctctgttgcccccccatacatctctcaagcatggggcccggtgct
ggagccagcactacgctggttgtggccccctacacctccaccacctcttcctccttctct
accaccttcgccactgacccgcccctggtcgatgcacgccactcacttttccctgaggag
acacagccagctaacaacctgccccgtcaggagagcagaccccacccagtgaagccatta
acctccagccaatcagagaagaaggaggggcgttcggttctggagaagctcaagtccacg
atccaccctggacgcggcgccgcccaccaggccgcagctgaagctgagaggagtcaggag
gtgcctgtggacaactcagctcagtaccagcacctgaccaacatggagctgatctccctg
ctgctgcagcaggagatggacatgcagaagcagcaggcggcctccgagcggcaggaggcg
cagctggggaaatgtgagggcgagctgaaaaaggtcaaggcacagatgcgagacctggag
gactacatcgataatctgctgctgcggatcatggagcagacgcccacgttgctgcaagtt
cgaaccagacacaagtga
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