Hippoglossus stenolepis (Pacific halibut): 118112578
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Entry
118112578 CDS
T08308
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118112578 (prom1a)
04090 CD molecules [BR:
hsp04090
]
118112578 (prom1a)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118112578 (prom1a)
CD molecules [BR:
hsp04090
]
Proteins
118112578 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
ATP1G1_PLM_MAT8
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
118112578
NCBI-ProteinID:
XP_035017885
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Position
7:23878453..23946748
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AA seq
886 aa
AA seq
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MWRTGILLLLPGLLLLAAGELQLEKEPRRLPPPGKLDFGYVPAGLYETLAHYEPGPIGIL
FHMVHTFLYAVQPNAFPQDLIVKLAKDKFGAIQTEYQKPENIVLTLQAIYYEIGFLVCAA
VGLLFAVLIPLVGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVL
CAYAANQNLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATAKKKVIYDLNHIG
PLLGGRIHDQLDKEVHPALDRVLNMAGVKIERAIKAMRETKEALENVSVSLEVLQEGTGK
LNFNLSLVRTSINRTLNDPGCHDERSDATTAQLCRNIRQSLSQLQISANFTRLPRVNTQL
EKVNDVLRTDLSTIVQRGFSSLNDTPHMVIEQTRSVVENVQNLVDGIGHNISSFSKAFPV
QNFLSNFTIFISHTHAKIEDHYPEIDKMDFYRWIGCIGLCCMVVLVLAFNYLGLLCGTLG
YDKHASPTTRGCISNTGGTMLMAGVGFSFIFSWVLMGLVTTMFLAGGNIEKLVCDPFHTK
ELFKVVDTPYLVNPEWRNFIPGYMYNDSELELTAETLYSTCKENKGIYLAMRLDKVFNIS
TFLNTTVFTKDVVSQLESVKIDLRGIILLEAEGKQNLLDFSEAGLSEINYADYLEEVNKG
VTVVDLLSFARELEAQTDLMPRGPLQTALKGHSGTLRQIHTQQITPMEQAMKYVRARGAL
NQSMRFLERTASDLPNKVLEVLDAIEAAQHLISHNATHLISRETGRYTTTIVGYFHQYIE
WVKTSLALEVAPCKPFSNMVDTAEIITCSFLVDSMNTFWMGLGCSTLFLLPSIILAVKLA
KFYRRMDTEDVYDDIETIPMKTVSQSPVNVHLIILFRERQACGALV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggaccgggatcctcctgctgctgccggggctgctgctcctggcggccggtgaa
ctccagctggagaaggagccgcggagactgccacccccgggaaagttggatttcggttat
gtgcccgcgggactctacgagactctggcccattacgagccggggccgatagggatcctg
ttccacatggtgcacacgttcctgtacgcggtgcagcccaacgcgttcccacaagatctg
atcgtcaaactggcaaaggacaagtttggagccattcagacggaatatcaaaagccagag
aacatagtgctgacccttcaggccatctactacgagataggcttcctcgtgtgtgcggcg
gtgggcctgctgttcgccgtcctgataccgttagtcggcctcttcttctgcatgtgccgc
tgctgcgacaactgcggcggcgagatgcaccagcgccagaggaagaacgcagactgccgg
cgcggcctgctgggaacgctgctcttctccacctcactggtcatcacgatcggcgtgctg
tgtgcatacgctgccaatcagaacctgagctctcaggtgaagaacatccgcagactggtc
aacagcaacatgagggacttgcacacgttcgccaatgacacgcccatgcaaatcgattac
ctgatatcgcagtacgccacggccaagaagaaagtcatctacgacctaaatcatataggt
cctttactgggtggaaggatacacgatcagctggataaggaggtccacccggccctggac
agagtgctcaacatggctggagtgaaaatcgagagagccatcaaagccatgcgagaaacc
aaggaggccctggagaacgtcagcgtgtctctggaggtcctccaggaggggacggggaag
ctcaacttcaacctgagcctggtccgcaccagcatcaaccgcacgctcaacgaccccggc
tgccacgacgagaggtccgacgccaccactgcccagctgtgccgcaacatccgccagtcg
ctgtcccagctgcagatcagcgccaacttcacacggctgccccgtgtgaacactcagctg
gaaaaggtgaacgacgtgttgaggacggacctcagcaccatcgtgcagaggggcttctcc
tctctgaacgacacgcctcacatggtgattgaacagaccagaagtgttgtggagaatgta
cagaacctggtggacggcatcggccacaacatcagcagcttctccaaggcgttcccagtg
cagaacttcctgtccaacttcaccatcttcatcagccacacccatgctaagatcgaggac
cactaccctgagattgacaaaatggatttctacaggtggatcggctgcatcggtctgtgc
tgcatggtggtcctggtcctggccttcaactacctgggcctgctgtgcggcaccctggga
tacgacaagcacgcctcgcccacgacacggggctgcatctccaacacgggagggaccatg
ctcatggccggcgtcggattcagcttcatcttctcctgggtgctgatggggctggtgacc
accatgttcctggctggagggaacattgagaagcttgtttgtgaccctttccacaccaag
gagctcttcaaggtcgtggacaccccgtacctggtcaacccggagtggaggaacttcatc
ccgggatacatgtacaacgactccgagctggagctgacagcagagacgttatacagcacg
tgcaaagagaacaaaggcatctacttggccatgcgtctggacaaagtcttcaacatctca
actttcctgaacactacagtgttcactaaggacgtggtgagtcagctggagagcgtcaag
atcgacctgcgaggaataatcctgttagaggcggaggggaagcagaacctcctggatttc
tctgaagcaggactgtcagagatcaactacgccgactatctggaagaggtgaataaagga
gtgactgtggtcgacctgctgtcgttcgcccgagagctggaggctcagaccgacctcatg
cccaggggccctctgcagacggctctgaagggccacagcggcacactgcgacagatccac
actcagcagatcacccccatggagcaggccatgaaatatgttagagcgaggggagcattg
aaccagagcatgaggttcctggagagaacggcctcagatctaccaaacaaagtcttggag
gttctcgacgccatcgaagccgcccagcacctcatctcccacaatgccacacatttaatc
agtcgggaaacaggaagatacacaacgaccatagttggctacttccatcaatacatagaa
tgggtcaagacgtccctggccctggaggtcgcgccctgcaaacccttcagcaacatggtg
gacacggcggaaatcataacttgtagtttcttggtggactctatgaacactttctggatg
ggcctgggctgcagcaccctcttcctgctgccgagcatcatcctggctgtgaaactggcc
aagttctatcgcaggatggacacagaggatgtttacgacgacattgagacaattcccatg
aaaacagtcagccaaagtccggtgaatgtgcacctgatcattttgttcagagagaggcaa
gcatgtggagctctggtgtga
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