KEGG   Hippoglossus stenolepis (Pacific halibut): 118112592
Entry
118112592         CDS       T08308                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsp03041]
    118112592 (smu1a)
Spliceosome [BR:hsp03041]
 Complex B
  Other components
   Complex B specific factors
    118112592 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F WD_LRWD1 PROPPIN VPS8_N LisH zf_topless DUF7165 Beta-prop_IFT122_2nd LisH_PAC1 PA14
Other DBs
NCBI-GeneID: 118112592
NCBI-ProteinID: XP_035017926
LinkDB
Position
7:25499096..25505630
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYINLENL
LARSYFDPREAYPDGSSKEKRRAAIAHALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLCRHVKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHVLSASSDGTVKVWNMKTSECSNTYKPLGTSAGTDITVNNVIILPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TIHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatctgcagacgtgatccgtctgatcatgcagtatctgaaagaa
aacaatctgcaccggaccctggtcaccctgcaggaggagaccacagtgtccctgaacacc
gtggacagcattgagagttttgttgcagacatcaacagtggccactgggacactgtcctt
caagccatccagtccctgaagctcccagacaagactctgatagacctttatgaacaggtt
gtgctggagctgattgagctgagagagctgggagcggctcgttcccttctcaggcagact
gaccccatgatcatgctcaaacaaacccaaccagagagatacatcaacctggagaacctg
ctggctcgctcctacttcgaccccagagaggcgtacccagacggcagcagtaaggagaag
cgccgagcggccatcgcccatgccctggccggggaggtcagtgtggtgcccccctctcgt
ctcatggctctgctgggacagtcactgaagtggcagcagcaccagggtctccttcctcct
ggtatgaccattgatctgttcaggggtaaagctgctgtgaaagatgtggaggaggagcgt
ttccccactcagctctgcagacacgtcaagtttggacagaaatctcatgtggaatgttcc
cggttctcccccgacggtcagtacctggtcacaggctccgtggacggcttcatcgaggtc
tggaacttcaccaccggcaaaatcagaaaggatctgaagtaccaggctcaggacaacttc
atgatgatggatgatgccgtgttgtgtatgggcttcagccgggacacagagatgttggct
accggagcgcaggatggaaagatcaaggtttggaagatccagagcggtcagtgtctgagg
agattcgaacgtgcccacagcaaaggagtaacgtgcgtgagcttctgtaaagacagcagc
cagctcctcagcgcctcctttgaccagaccatcagaatccatggactgaagtcaggtaaa
actctgaaggagttccgtggtcactcctcatttgtcaacgaggccacgtttacaccggat
ggtcaccacgtcctcagcgcttcctccgacgggacagtgaaggtttggaacatgaagacc
agcgagtgctcaaacacctacaaacctctgggcacgtcggccggcaccgacatcaccgtc
aacaacgtcatcattctgcccaagaacccggagcactttgtcgtgtgtaaccgctccaac
acggtggtcatcatgaacatgcagggacagatcgtgaggagcttcagctccggtaagagg
gaaggcggtgactttgtgtgctgcacgctgtcgccccgcggcgagtggatctactgcgtg
ggagaggactttgtgctctactgcttcagcacagtgacgggcaaactggagagaacactg
acgatccacgagaaggatgtgatcggcatcgcccaccacccgcaccagaacctcatcggc
acctacagtgaggacggccttctgaagctctggaagccttga

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