Hippoglossus stenolepis (Pacific halibut): 118112614
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Entry
118112614 CDS
T08308
Symbol
lamp2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03272
Virion - Hepatitis viruses
hsp03273
Virion - Lassa virus and SFTS virus
hsp04140
Autophagy - animal
hsp04142
Lysosome
hsp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118112614 (lamp2)
03272 Virion - Hepatitis viruses
118112614 (lamp2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118112614 (lamp2)
04142 Lysosome
118112614 (lamp2)
04140 Autophagy - animal
118112614 (lamp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118112614 (lamp2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118112614 (lamp2)
04090 CD molecules [BR:
hsp04090
]
118112614 (lamp2)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
118112614 (lamp2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
118112614 (lamp2)
Other autophagy associated proteins
RNautophagy/DNautophagy
118112614 (lamp2)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
118112614 (lamp2)
CD molecules [BR:
hsp04090
]
Proteins
118112614 (lamp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
DUF1968
SIT
Glyco_hydro2_C5
Haem_bd
Motif
Other DBs
NCBI-GeneID:
118112614
NCBI-ProteinID:
XP_035017972
LinkDB
All DBs
Position
7:19230380..19241611
Genome browser
AA seq
418 aa
AA seq
DB search
MARFAAFVSLLAAGIVFQLSHGVEVNVTDKEGKLCLYANLMVNFSVSYPAGEKIDTVEFE
LPSEVTTNGSECGATSSTLKLNFGDGRSWSVNFTMDGNVYQADYITFSYNLSDTTVFPSS
GSNETASVTVKSQITNVGVDTCYSCNSKDMILTDMVNMTLSSVLIQAFVSEGNKSENITS
CSADQPVTSPPPTTQGTNATTPAPVTNATSTAPPPTTTPTPTLPPPNTGKYSVNSDNTTV
CLLADFGLRISIKQGETYQEMNLEPNKTTASGSCGVNSSELQLVSSTMTIMLTFINDTAK
FRLHAVNFTAKTGSGVDFNAVNTNLTLWEAAIGSSYMCNKEQNYTITNLLSFYTFNLRVQ
PFGIAKGVFNTAEECKTDVDSFLVPIAVGVALLVLIVIVLLAYFIGRKRNMSTGYESF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcccgattcgctgcattcgtttcgctcctcgccgctgggatcgtcttccagctgtca
catggcgttgaagtgaacgtcacagacaaagagggcaagctctgcctctatgccaacctc
atggtcaacttctcagtctcgtatccagctggagagaagattgacacagttgagttcgaa
cttccaagtgaagtcacaaccaatggaagtgaatgcggcgccacaagctcaacgctgaag
cttaatttcggagacgggcgctcctggagtgtgaacttcaccatggatggaaatgtgtac
caggcagactacatcaccttttcctacaacctcagtgacaccactgtcttccctagctct
ggatcaaatgaaactgcatccgtgaccgtgaagtctcagattacaaacgtgggtgtggat
acctgctactcgtgcaacagtaaagacatgatacttactgatatggtcaatatgacactg
tccagcgtgctcatacaggcttttgtgagtgaaggcaacaagagtgaaaatataacatct
tgtagtgcggatcaacccgtaacctctcctcccccgaccactcaaggcaccaatgcaacc
accccagctcctgtcacaaacgccacttccactgcccctcctcctaccaccaccccaacg
cccaccctccctcctcccaacactgggaagtacagcgtcaactcggacaacaccacagtc
tgcctgttggccgactttggcctgcggatcagtatcaagcaaggagagacgtatcaggag
atgaacctcgaacccaacaagaccacggcatctggatcgtgtggagtcaacagcagcgag
ctgcagttggtgtcaagcactatgaccatcatgttgaccttcattaatgacacagcaaag
ttccgcctgcatgccgtcaacttcaccgcaaagacgggctctggtgtggactttaatgcg
gtgaacaccaacctgactctatgggaggcggccatcggcagctcctacatgtgcaacaag
gagcagaactacaccatcaccaacctgctcagcttctacaccttcaacctgcgagtgcag
ccctttggaatcgcaaagggggttttcaatacagctgaggaatgcaagaccgatgtggac
agcttccttgttcccatagctgtcggagttgccctgcttgttctcattgttatcgttctt
ctggcctatttcatcgggagaaagagaaacatgtccaccggctacgagtctttctag
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