Hippoglossus stenolepis (Pacific halibut): 118112666
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Entry
118112666 CDS
T08308
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118112666 (aff2)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118112666 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
118112666
NCBI-ProteinID:
XP_035018060
LinkDB
All DBs
Position
7:6983121..7138236
Genome browser
AA seq
1574 aa
AA seq
DB search
MDLFEFDFFRDWELEQPCHLESERSALKRREWERRNQEVQQDEDLFSTGFNLFGEPYKTN
KGDALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSSVNNNLQTPTTSATERPTMDS
QLFNETLRGGVGGGGGGVEAGGDKRMVNATSSSSTSMQPPATTTSSSSTSTNPHQNSKKS
RNSMDWSRGGHGQSSQGAGLVLGLGQSGQGQATGSTGGRGKISLLEEQQMQRHEELFSSL
KDELGLKGDSSPCSSSSSSSSSSSSSRRHSSHPSKALPLPDGGNFRSSTMDGGHFKSSTN
TEAGGHFKSSPFENETGSHFSMSSSPLASTSVVTTPTPGLTTPTSGLTTPTFPPGSLSGK
PVAVQQKPTAYVRPMDGQDQAPSDSPQLKPPLVATEGFNSSQAYGGNSGNVKSKLPKLTL
SHTGEVSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKESQHVTSGYNT
QKRCSVSANKPAAKPPTAPQKSMLEDDLKISSDEEEAEQQVSDKPKARGTALSGASGNSS
SESESSSESDTDESESSSSDSEYNRASRTHTPEPEPPSTNKWQLDSWLNKVQAQTKPLVP
PQPEHHGTGSINQGPETLSPGREAPAVGTAAKAKPCGSSSTPVPAAPTVEHKDTRGAFCP
GREKAKAKLSQKASGEGQRSKMRLSPALLSGPEVTTPRRNTTGKKQPRRTERSNSAEDNQ
NQTWSRANQHSSPAAREKDLLPSPSLEHQNPPRPRGKPPSGKTAPRKEPRGGANSNNNTV
TPPAVPQQTPVPIPAVSVNQQDKRKHRGPSTKITPKSREFIETDSSSSSSECHSESEEAM
KIPALPQTTRPAINTQTLSSTHMHTPLLPCLGPAASLGSLGTFGGKGLRVKDSSNVTTNG
SSSSNSSISSGNNGSSNSCNSLSISNISGSFGPSVPDPGGLGGQCKDLESMSPPSNTGHE
VPLSPLREYQEIQSLWVKIELSLLSRVPGGQGLGEKSRVGLTERDGSEGRDRDRQGERTG
VAERERQKQEDREWPGLRERQRVTKGERQEDESERLVQDRERQGDRDRLTERERQTDRED
RERLGLGERERTTARDREKACLGLGVLDNPPVQEQSNPRLAGRTERGENEGKHRRQAAGS
TMVPTEKHASKNKRKHKADHTESSVNGNKKLRLDKDCQLLPPCISPIHNHKNSSTEISLN
RKQSRRRNEKLLPPLLSPLSDDPPRKRTCDSISSLSQEVGASGILPCSTTSTSSSSSSSH
RHRRGEGKVSSHTRNGSEMDPPSEKPCGDGCHANGQSDSEVWSEPLTEAAEPRRPRLSFS
DVVHSADYHMQEAKRLKHKADALMDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTM
YSETVELIRYAMRLKNFSSHSATVAEKKLAVLCNRCLSLLYLRMFHLKKDHAVKYSRSLM
EYFKNSAKSSHQAPSPWRTNGKVNGTPSPLSLSPSPASSGGGGGGSGSAPSSLGSVAIPQ
RIHHMAASHVNITNNILRSYEHWETADRLATDSQDFFQELDTVMEPLSQQSSMTELVRYI
RQGLHWLRIEARLL
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtttgaattcgactttttcagagactgggagcttgaacaaccatgtcatctg
gagtcagagcgcagcgccctgaagaggagagagtgggagaggaggaatcaggaggtccaa
caggatgaggacctcttctcaactggattcaacctgtttggagaaccttataaaactaat
aaaggtgatgcattggccagccgcgtccagaacacgctgggctcctacgaagaaatgaaa
gacctgttaaccagccattccaaccagagccacttggtgggtatccccaaaggcagcagt
gtgaacaacaacctgcaaactccgaccacttcagccacagaaagacccaccatggactct
cagcttttcaatgaaacgttaagaggaggagtaggtggtggtggaggaggagtagaggct
ggtggggataaaaggatggtgaacgcaacttcctcatcttcaacctccatgcaacctcct
gctacgaccacgtcatcatcaagcacatcaacaaatccacatcagaattcaaagaagtcc
cgaaactccatggactggtctaggggaggccacggacagagttcccaaggagcaggcctt
gttttggggttaggacagagtggtcaggggcaggctacaggatccaccggtggcagagga
aaaatatctttattagaggaacaacaaatgcaaagacatgaagaactgttcagctcacta
aaagatgaactaggtctaaaaggggattcaagcccttgttcttcctcatcgtcttcttca
tcctcttcatcttcttcgagaaggcactcttcccacccctccaaagcccttcctctccca
gatggtggcaattttcgatcttccaccatggacggtggccactttaagtcttccactaac
acagaagccggaggacattttaaatcctccccgtttgaaaatgaaacaggttctcacttc
tcgatgtcctcgtccccgctggcttccacatcggttgtaacgacccccactcctggtctg
accactcccacatccggactaactacccccaccttccctcctggtagcctatcagggaag
ccggtcgcagttcagcagaagcccacagcgtatgttcgaccaatggacggccaggaccag
gcgcctagtgactctccccagcttaaaccccctctagtggccacggaaggatttaacagc
agtcaggcttacggaggaaactctggaaatgtgaagagtaaactgccaaaactgacgctg
agccacacaggggaggtcagccttccaaatgactccagctgtgttgaagagattttgcgg
gagatgacacattcctggcctcctcctctcacagccatacacactcctgggaaggctgac
cagacaaagttccccatcccaaacaaagagtcacagcatgtgacctcaggctacaacacc
cagaagcgatgtagtgtatcagctaacaagcctgctgctaaaccaccaactgcaccacag
aagtcgatgctggaggatgacctgaagatcagcagcgacgaggaagaggccgaacaacag
gtgtctgacaagcccaaagccagaggcacagccctgagtggtgcatcaggaaacagcagc
agtgaatcagagagcagctcggagtcggacacagacgaatccgagagcagctccagtgac
agcgaatacaaccgggcctcacgcacacacacgccagagcccgagcccccgtccaccaac
aagtggcagctggacagctggttgaacaaggtccaagctcaaaccaaacctctggttccc
cctcagccggaacatcatggcacaggctccatcaaccagggcccagagactctctctcca
gggagagaagcaccagcagtgggtacagctgcaaaggccaagccctgtggatccagcagc
accccagttccagctgcaccaacagtggagcacaaggatacaagaggagccttctgcccg
ggcagagagaaggccaaggccaagctcagccagaaggcctcaggagagggccagaggtcc
aagatgaggctgtcaccggccctgctgtctggaccagaggtcacgactccgaggaggaac
accacaggaaaaaaacagcccagacggacagagaggtcaaacagtgcagaggataatcag
aaccagacatggagcagagcaaaccagcacagcagccctgcagcgagagagaaggacctg
ttgccgtccccctccctggagcatcagaaccccccaaggccacgcggcaaaccccccagt
gggaaaactgcccccaggaaagagcctcgcggtggtgccaactccaacaacaacacagtg
actccaccagcagtgccacagcaaacacctgtgccaatacctgccgtcagtgtaaaccag
caggataagaggaaacaccgagggccgagcaccaaaatcacacccaagtcccgggaattt
atcgaaacagattcctcctcctcctcctcggaatgccattcagagtcggaggaagccatg
aagatccccgctctgccgcagacaacacgccctgccattaacacgcagactctgtccagc
acgcacatgcacacgcctctcctcccatgccttggccctgctgccagtttggggagtctg
gggacatttggagggaaaggactgcgagtcaaagacagtagcaatgtgaccactaatggt
agcagcagtagtaatagtagcatcagcagtggaaacaatggcagcagtaatagctgtaac
tccctaagcattagcaacataagtggttcctttggtccttctgttcctgatcctggaggg
ttaggaggacagtgtaaggacctggagtccatgtcaccaccttccaacacggggcacgag
gtgccactttccccccttagggagtaccaggagatccagagtttatgggtgaaaatcgag
ctaagtttgctcagcagggtgcccggcggccagggcttgggggaaaaatcccgggtggga
ctcacagaaagggacgggagtgaggggagggacagggacaggcagggggagaggacaggt
gtagcagagagagagagacagaagcaggaagacagagagtggccagggctgagagaaaga
cagagggtaactaaaggggagagacaggaggacgaaagtgagcgattggtgcaggacaga
gagaggcaaggtgacagagacagattaacagagagagagaggcagacggatagagaggac
agagaaagattagggcttggggagagggaaaggacgactgcgagggacagagagaaggca
tgcctgggtctgggggtcctggacaacccccctgtgcaagagcagagtaatccccggctg
gctgggaggacagagagaggagagaacgaaggtaaacacaggagacaagcagctgggagc
acgatggtccccacagagaaacacgccagcaagaacaaaaggaaacacaaggctgaccac
actgagtcatcagtcaacggcaacaagaagctgcgactggacaaagactgtcagctcctc
ccaccctgcatctctccaatacacaaccacaagaacagctctacagaaatttctctgaac
aggaaacagtctcggcggcgcaacgagaagcttcttcctcccctcctgtcgcccctctct
gacgaccccccacgtaaacgaacctgcgacagcatttcctctctcagccaggaggtcggc
gcctcagggattctgccctgctccaccacatccacctcctcctcctcctcctcatctcac
aggcaccggagaggtgaaggcaaggtgtcgtcacatacgagaaatggcagcgaaatggat
cccccgagcgagaagccctgtggagatggttgccatgccaacggacagtcagactcggag
gtgtggtctgaaccactgacggaagctgcagagcctcgcaggccaaggctgtcgttcagt
gacgtggtccacagtgcagactaccacatgcaggaggcaaagaggctgaagcacaaagct
gatgctctgatggacaaatttggtaaagcagtgaactacgcggacggtgccctctccttc
atagagtgtggaaatgctatggagcgagatccactggaggctaaatcaccttataccatg
tactcagaaactgtggagctcatcaggtacgccatgaggctgaagaacttcagcagccat
tcagctactgttgctgagaagaaactcgccgtgttgtgtaaccgctgtctgtctctgctg
tatctgaggatgttccatctgaagaaagaccacgctgtcaagtactcgcggtcgctcatg
gagtacttcaagaattcagccaagagttcccaccaagcaccttctccgtggaggaccaat
ggaaaggtcaatgggactccgtctccactctcactcagcccgtccccagccagcagcgga
gggggagggggaggatctggaagtgccccaagttcattgggcagtgtggctattccccaa
cggattcaccacatggctgccagtcatgttaacatcaccaacaacatcctgcggagctat
gaacactgggaaacggctgacagactggccactgatagccaagatttcttccaggagctg
gacacggtcatggagccactgagtcagcagagcagcatgactgagctggtccgatacatc
aggcagggactgcactggctccgcatagaggctcgtctgctgtag
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integrated database retrieval system
