KEGG   Hippoglossus stenolepis (Pacific halibut): 118112717
Entry
118112717         CDS       T08308                                 
Name
(RefSeq) integrin alpha-6
  KO
K06485  integrin alpha 6
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04382  Cornified envelope formation
hsp04510  Focal adhesion
hsp04512  ECM-receptor interaction
hsp04514  Cell adhesion molecule (CAM) interaction
hsp04518  Integrin signaling
hsp04810  Regulation of actin cytoskeleton
hsp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118112717
   04514 Cell adhesion molecule (CAM) interaction
    118112717
   04518 Integrin signaling
    118112717
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118112717
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118112717
   04810 Regulation of actin cytoskeleton
    118112717
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    118112717
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsp04147]
    118112717
   04515 Cell adhesion molecules [BR:hsp04515]
    118112717
   04090 CD molecules [BR:hsp04090]
    118112717
Exosome [BR:hsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118112717
  Exosomal proteins of breast milk
   118112717
Cell adhesion molecules [BR:hsp04515]
 Integrins
  Integrin alpha subunits
   118112717
CD molecules [BR:hsp04090]
 Proteins
  118112717
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 MFS_Mycoplasma
Other DBs
NCBI-GeneID: 118112717
NCBI-ProteinID: XP_035018128
LinkDB
Position
7:complement(21280657..21290301)
AA seq 1058 aa
MAQHWHMLYLCSVWHLQTLNVAAFNLDTHNVLQRSGDPGSLFGFSVAFHQQLRPARKNLL
LVGAPQAKHQNQVNVTGVVYQCDLTTTSERCQPIEFNSEEFLNSKDINGQWMGVRVTSQG
PGQNVMTCAHRYQQWSPSPNANVPHLVTGQCYLLGDDLEAGTEERTWRRVVCDSEHLTRR
RKDHEWFAYCQQGHGAAFAKDNRSLLFGAPGAYQWKGIVRLELLDNRDVFSEDPRETGNI
DLFNPKLIPLQRASYLGFSIDSGMTLIRKGELTIVSGAPRGGFSGQVAFLKADPVAKRNL
SVEFILSGPGLASSFGYDVAVVDLNNDGWEDLAVGAPQFSVRDGSVGGAVYIYINNRGRN
WEDVVPTQLLGHRDSLFGLAVENIGDINQDGYGDVAVGAPYDGSGRVYLYCGSSDGINKK
PAQVLSSGSKNIHLFGYSLSGNLDVDDNQYPDLAVGSLSDSVFIYRARPVVSVGSTLQVQ
PIEIDITKDQCDKLTCYFTAQACFTYTSHPASFNPKLKLNFTFEGDAERRKARLPPRVDF
LGLSQGKLELPGQGREMCVDTKLRILRDIKDRLNSIPVSVTLSLWSSSQTTRTSADLPDV
TPVLNLYQQRSTVSEILLINKGCGSDNICQSNLELKYKFCSRKTLKDQDVFTSLAREDGV
AVITPSEEDIALEITVTNRNGDDAHQSHSIIMLPDTLHYSSIIYDTAAETQMSCTANDKG
TRIDCELGNPMRRDAEITFYVLLTTSSISLSTEDVNVTVQLTTTSVQTIQPVEAVAKVVF
ELELQVYGRARPSQVSLGENVMGESAIKTVDEIGTRVQYEFRITNLGRPLKYFANASLNI
YWPKENSVGKWLLYLTQITSDGVQSISCSPAEEINPLKHVKGWLHPARKRREAEHEALST
DVFPFLSKKRKYKTLTCADGLKCVEIRCPLLGLDSSAVMVLHSYLWNTTLTEDYSSLNYL
DIVVDATLSLTNSPENIGLKMEKPGTKVKLTVFFEKETKYFTKVAWWIILLTVIALLLLL
AVSAYLMWKHESLNCLAHNKKPTEHKEDVNPETAPLTA
NT seq 3177 nt   +upstreamnt  +downstreamnt
atggcccagcattggcacatgttgtatctgtgcagtgtttggcacctccagacccttaat
gtggcagctttcaacctggacactcacaacgtgctgcagagaagcggagatccgggaagc
ctgtttggattttctgttgcgtttcaccagcagctgaggcctgccagaaagaacctattg
ctggtcggagctccacaagcaaaacaccagaaccaggtgaatgttacaggtgttgtttac
cagtgtgacctgactacgacatccgagcgctgtcagcccattgagtttaacagtgaagag
ttcctcaatagtaaagacataaatggccagtggatgggagttagagtgacgagccaaggt
ccgggtcaaaatgtaatgacttgtgctcatcgataccaacagtggagcccgagcccaaac
gcgaatgtccctcacctggtgacgggtcagtgttaccttctaggagacgacctggaggcc
gggacggaagagaggacctggaggagggttgtttgtgattctgagcacctcaccagacgc
cgaaaggaccatgagtggtttgcgtactgccagcagggccacggagctgcttttgcaaag
gacaaccggtcgctgttgttcggggcccccggcgcttatcagtggaaagggattgtacga
ctggagcttttggacaaccgggacgtctttagtgaagatcctcgtgaaacggggaatata
gacctctttaacccaaagctcattcctctccagagagccagctacctgggattctccatt
gactctggtatgaccctgatcaggaagggtgagctgacgattgtatcaggagcgccacga
ggaggcttcagcggccaggtggcttttctcaaagcggatcctgtggctaagagaaatttg
tctgtggagtttatcctctctggtccaggcttggcttcctcctttggttacgatgtggca
gtggtggatttgaacaatgatggatgggaggacctggctgtaggagcaccacagttctcc
gtcagagatggttctgttggaggagcagtttacatctacatcaacaacagaggcagaaac
tgggaggatgttgttccaactcagcttcttggacatagagactccctgttcggcctcgca
gtggaaaacataggagacatcaatcaggacggttatggagatgttgctgtgggggcaccg
tatgatggttctggtcgggtgtatctctactgtggctcctctgatgggatcaacaagaag
ccagcacaggttctctcatcaggatccaaaaacattcatctgtttggatattctctgtct
gggaacttggatgtggatgataaccagtacccggatttggccgtcggctcgctctcagat
tctgtttttatttacagagcgcggccagtggtcagtgttggcagcactctacaggtgcaa
ccaattgaaatagacatcacaaaggaccaatgtgataaactcacgtgttatttcacagct
caggcgtgttttacctacacctcacatccggcatcgttcaaccccaaactgaagctcaac
ttcacctttgagggtgacgctgagaggaggaaggcgaggcttcctcccagagtcgacttc
ctgggtttatctcaaggaaaactggagctgccgggacaagggagagaaatgtgtgtcgac
accaagcttcgaattctgcgtgatatcaaagacaggctgaacagcatccccgtctccgtc
actctgtctctgtggagctccagtcaaacaaccaggacaagtgcagatctgcccgatgtg
acccctgtcctcaacctctaccagcaaaggagcactgtctcagagatcctcctaataaac
aagggctgtggcagcgacaacatttgccaaagtaacctggagttaaagtacaagttctgt
tccagaaaaacactaaaggatcaggatgttttcacatcactcgccagagaggatggtgta
gcagtcatcactccctcagaggaagacatagccttggaaataactgtgaccaacagaaac
ggggatgacgcgcaccagagtcactcaatcatcatgctcccagatactcttcattactcc
tctattatctacgacacggcagcagaaacacaaatgagttgcacagccaatgacaaagga
acacgaatagactgtgagcttggaaacccaatgcgaagagacgctgagattactttttat
gtcctactcaccacgtccagcatttccctgagtacagaagacgtcaacgtcaccgtgcaa
cttaccacgacaagtgtgcagaccattcaacctgtagaggcagtcgccaaagtggttttt
gagctggagcttcaagtttatggacgagccagaccttcccaagtgtcacttggtgaaaat
gtgatgggtgaaagtgccataaagacagtggatgaaattggaacccgggttcaatatgag
tttaggataacgaatctgggcagaccactgaagtatttcgccaacgcgtcactaaacatc
tactggccaaaggagaactctgtgggaaaatggcttctgtacttgactcagatcaccagt
gacggtgtccagtccatctcctgctcacccgcagaagaaatcaatccactcaaacacgta
aagggttggctccacccagcgaggaaaagacgtgaagccgaacatgaagcgctctctact
gatgtgttcccgtttctgtcaaagaaaaggaaatacaaaactttgacctgtgcagatgga
ctgaagtgtgtggagatacgctgccctctgctgggtctggacagttctgcagtgatggtt
ctgcattcatacctctggaacaccactttgactgaggattacagctctttgaactatctt
gacattgtggtggatgcgaccctcagtttaaccaactctccagagaatattggacttaaa
atggagaagcccggcacaaaggttaaactcacagtgttttttgagaaagagactaaatac
ttcaccaaagttgcctggtggataatcttactcacggtcattgctttgcttctgctgctg
gccgtttctgcctacctgatgtggaagcatgaatccctcaactgtcttgcacataacaag
aagcccactgaacacaaggaagatgtaaacccagagactgctcctcttacagcctga

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