Hippoglossus stenolepis (Pacific halibut): 118112768
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Entry
118112768 CDS
T08308
Symbol
clcf1
Name
(RefSeq) uncharacterized protein clcf1
KO
K05421
cardiotrophin-like cytokine factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118112768 (clcf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118112768 (clcf1)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
CSF and other factors
118112768 (clcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNTF
Motif
Other DBs
NCBI-GeneID:
118112768
NCBI-ProteinID:
XP_035018210
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All DBs
Position
7:14904938..14919527
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AA seq
506 aa
AA seq
DB search
MTSLCGVHQHQLILLLAAAMVMAIDSSHNLASERSSIESTYELTKYLEYQLKEIKDVYLT
YLGPPFNEKDFSPPRPNSTALSLPIAATRLELWHGLENQARLAQNQKAYSVLLAAVRELA
RSTLCPSLKTSLLHFCTGLDGLLGSISALMTTLGYTLPPPSANMRSSAGELQYPQSGIGG
DRPAPLMSQSLYRSRAGTRTEAGHRNNQKRSGMRVVRGDREDGVNVDLIEKKRAKEGGRA
ETTSAGGRSGGSREKGRGERGRRGKREEPESRIWTASEDERAGEEGEEELEREVGVERWG
RRLLSISEDGEEEGRQSEPGVELSYLDTQRSVSLLQPTIVDNNNNQYSYNLNSRHTDTIR
KEDGFFVVNSRGLMLEEGQQTNMEAASSSSAFYHQRRPPRSLFPPTLQPPLSTLSLLYQF
GAGERHTLLPQPVPLSLQRGTSLLSHPLTPLLSSSSSSSSSSLLSVRPTMNDFARKVEGF
WILRELQSWLWRSAKDFNRLKKRLRG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtttgtgcggagtccatcaacaccagctcatcctgttattggctgctgccatg
gtgatggccattgattcgtcacacaacctggccagtgagaggagttcgatagaaagcacg
tatgaactcaccaagtacctggagtatcagctcaaggaaatcaaagacgtatatctcacc
tacctaggccctccattcaacgagaaagacttctcccccccgcggcccaacagcacggct
ctgtccctgcccattgccgccacccgcctggagctgtggcatggcctggagaaccaagcc
cgacttgcccagaaccagaaggcctactctgtgctgctggcggctgtcagggagctagcc
cgctccaccctctgcccctccctcaagacctccctgctgcacttttgcacgggcctggac
ggactgctgggctctatatctgcgctgatgaccacgctcgggtacacgcttcctcctcca
tctgcaaacatgagaagtagcgctggcgagctgcaataccctcagagtgggataggaggc
gaccggccagctccactgatgagccagagcctgtataggtccagagccgggactaggacg
gaagcgggtcaccgtaacaaccagaaacgaagtgggatgagggtggtcagaggagatcgc
gaggatggcgtcaacgtggacctgatagaaaagaaaagagcaaaagagggggggagagct
gagacgacttcagctggaggaaggagtggcggatcgagggaaaagggaagaggagaaaga
gggaggagaggaaagagggaggagcctgagagcaggatatggaccgccagcgaagacgag
agagcaggggaggagggagaggaggagctcgagcgagaggtaggggtggagagatggggg
aggaggttgttgagcatcagcgaggatggcgaggaggaggggaggcagtcggaacctggg
gtcgaattgtcgtacctggacacgcaaagatccgtctcccttctgcaaccaaccatcgtt
gacaacaacaacaatcagtacagctacaacctgaactcacgtcacacagacaccatcaga
aaggaagatggattttttgtggtgaatagcagagggttaatgctggaggaggggcagcaa
acaaatatggaggcggcctcctcttcctcagctttctatcaccagcgtcggcctcctcgc
tccctcttcccccccacactccaacctcccctctccaccctctccctcctctaccagttc
ggagcaggtgagaggcacaccctcctcccccagcccgtccccctgtctttacaaaggggc
acatccctcctttcgcaccctctgaccccgctgctctcctcctcctcgtcctcctcttcc
tcctcactcctgtctgtgcggccgacgatgaacgacttcgcgaggaaggtggaggggttt
tggatattgcgggagctgcagagttggctgtggcgatcggcgaaggacttcaaccgcctc
aagaaaagactaagaggttga
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