Hippoglossus stenolepis (Pacific halibut): 118112805
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Entry
118112805 CDS
T08308
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04510
Focal adhesion
hsp04540
Gap junction
hsp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118112805 (pdgfc)
04020 Calcium signaling pathway
118112805 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118112805 (pdgfc)
04540 Gap junction
118112805 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118112805 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118112805 (pdgfc)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Growth factors (RTK binding)
118112805 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
118112805
NCBI-ProteinID:
XP_035018273
LinkDB
All DBs
Position
7:complement(23044438..23088490)
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AA seq
364 aa
AA seq
DB search
MCVVSQTIPSTAPCDRLPPLIQMILPFFFLLASLLQQYGSEAESTHVTKFHLPSIKEQNG
VQDSHQEKIITVSGEGMVQSPDFPHRYPRNTALTWRLVAPSNMRIQLNFDERFGLEDPED
GICKYDFVEIEDLTEKTILGHWCGSQSVPASQTSKGSQVRIRFISDEYFPSEPGFCIRFS
LQPVSASGPEVPAVPAPSLQGIEDLSEAVAGLGTMEEVMKYLEPERWQLDMEELYKPSWH
VLGKSFVHNKKARGGADLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRC
GGNCACCSHRCYDCQCVPTRVTKKYHEVLLLKHRSGGRGMQKTMTDVPLEHHEECACVCN
DDWD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggtgagccaaaccatcccgtctacagcgccctgcgatcgcctgccaccactc
atccaaatgatccttccattctttttcctccttgcatcgcttctccaacaatatggctcg
gaagctgaatcaactcatgtcaccaagtttcaccttccaagcataaaggagcagaacgga
gtgcaagattcccatcaggagaagatcataacagtgtctggagagggaatggtccagagc
ccagacttcccacataggtatcccaggaatactgcattgacctggagactagtggcaccc
agcaacatgaggatccagctcaactttgatgagaggtttggtctggaggacccagaagac
ggcatctgcaagtacgactttgtggagatcgaggatctgactgagaagaccatcctgggt
cattggtgcgggtcacagtcagtaccagccagtcagacatccaagggcagccaggtcagg
attcgcttcatctctgacgagtactttccctctgagccgggattctgcattcgcttctcc
ctccagcctgtgagtgcatcaggtcctgaggtccctgcagttcccgctccgtccctgcag
ggcatcgaggatctgtccgaggctgtggccgggctgggcaccatggaggaggtcatgaaa
tacctggagccagagcgatggcagctggatatggaagagttgtacaaaccctcgtggcac
gtgctcgggaaatccttcgttcataataagaaagccagaggaggggctgatctcaatctg
ttgcgagaggaagtgcgactgtacagctgcacgccgcgcaacttctctgtatccttgcgt
gaggagctgaagaggacagatgccattttctggcccagctgcctcctggtgaagcgctgt
ggtggaaactgcgcctgctgctctcaccgctgctacgactgtcagtgtgtccccaccaga
gtcacgaagaaataccacgaggtcctgctgctgaaacaccggagcggaggccgaggcatg
cagaagaccatgactgatgtgcccttggagcaccacgaggagtgcgcctgtgtgtgtaac
gatgactgggactga
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