Hippoglossus stenolepis (Pacific halibut): 118113172
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Entry
118113172 CDS
T08308
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118113172 (nop2)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
118113172 (nop2)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118113172 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
Motif
Other DBs
NCBI-GeneID:
118113172
NCBI-ProteinID:
XP_035018506
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All DBs
Position
8:17908177..17913641
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AA seq
767 aa
AA seq
DB search
MGRKLDPTTYVKRGPGRKSRKQQGAENELAKFIPDEDTDPKRLSSRGRKRAAKRVQKVKK
PEDAAEEKSKTVFTDENSKWLKPATRKRKIDDAESGDSSDEHWEDEEDEEEEEKVEQQQI
KKGGKDQGKKGAKSKIKPVVEEVKEAEDDEAEDDDDAEDDDDDDDDEEMVDDYGTLDDVS
GEAAEEESDGEELLPIERAAKKEKKLKEILGLESDEDDDDEEDDDKDGVKEAKSDEDEED
TVQANMDEMDKFRLPGAEESEKEGILMCVDLKEIHQRIKDNIDVLCNFSTKREEGKDRTE
YISLLKKDLCTYYSYNDFLIEKLIDLFPLSELVDFLEANEIHRPVTIRTNTLKTRRRDLA
QALINRGVNLDPLGKWSKVGLVIYDSSVPVGATPEYLSGQYMLQGASSFLPVMALSPQEG
ELVLDMTSAPGGKTTYIAQLMRNTGVIVANDANADRLKSVVGNIHRLGVTNTVVCNYDGR
RFPKVMGGFDRVLLDAPCSGTGVIAKDPVVKTSKDEADIQRSAHLQKELILAAIDSVNAA
STSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTRFRERRFHPSLRL
TRRFYPHSHNMDGFFVAKLKKFSNVVPTEAAGTEEENSEAPESTAVAESPETKPSKANKA
VPGKAGGLKGKAQTNGTPGKEKANQPKGKKDLPSGPKKAKIAKMDEETVKGSEAKKPKAK
TKASKGSKKQGGKFEKKKGKKKSPMKSKKRMGKNKFRKLKRMLEKNE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccacctatgtgaagagaggacctgggagaaaatccagg
aaacagcagggagcagagaatgagttggccaagtttatacctgatgaggatactgaccca
aaacgtctgtcaagtagaggcaggaaaagagctgcaaagagagtccagaaggtgaaaaag
cctgaagatgctgctgaggaaaagagcaagacagttttcactgatgagaacagtaaatgg
ttgaaaccagcaacaaggaagcgcaaaatagatgacgctgaaagcggggacagcagtgat
gaacactgggaagatgaggaagatgaagaagaagaggagaaggtggagcagcagcagata
aagaaaggaggaaaagaccaaggaaagaagggtgcaaaatccaaaattaagccagtggtg
gaggaagtgaaggaggctgaggatgatgaagctgaggatgacgacgatgctgaagatgat
gatgatgatgacgacgatgaagaaatggtcgatgactacggaactcttgatgacgtcagt
ggagaagcagcagaagaagaaagcgatggagaggagctccttcctatcgagcgtgcagca
aagaaagaaaaaaaactgaaggaaatcttgggtctagagagtgacgaagatgatgatgat
gaggaagacgatgacaaagacggtgtaaaggaagcgaaatcagatgaagatgaggaagac
acagtacaagccaacatggatgaaatggataaatttaggcttcctggagcagaggagagt
gagaaggagggtatcctgatgtgtgtggacctgaaagaaattcatcagagaataaaagac
aacatcgacgtcctgtgtaatttctcaacaaagcgcgaggaggggaaagacagaacagag
tacatctctctgctgaagaaagatctctgcacctactacagctacaacgacttcctcatt
gagaaattaatcgacctcttccccctctcagagctggttgacttccttgaggccaatgaa
attcatagacccgtcactattcggacaaacacactgaaaacgaggaggagagacctcgca
caggccctgatcaacagaggagtgaacctcgacccactggggaaatggtctaaagtgggt
ctggtcatctatgactcctcagtacctgtcggtgcaacaccggagtacctgtctggtcag
tacatgctgcaaggagcatccagttttctgccagtcatggctctttctccacaggaggga
gagttggtgttggacatgacttcagctccgggaggcaagaccacctatattgctcagctg
atgagaaacactggggtgatcgtggctaacgatgctaacgctgatagattgaagagcgtg
gttggaaacatccaccgtctgggcgtcaccaacacggtggtctgcaactacgatggccgg
cggttcccaaaggtgatgggcgggtttgaccgagtgctgctcgatgctccgtgctcaggc
acaggagtcatcgctaaagatccagttgtgaagacaagcaaggacgaggcagacatccag
cgctctgctcacctgcagaaagagctgatccttgctgctatagactctgtcaatgctgca
tcgacctcaggaggatatctggtctactgtacatgttcaataatggtggaggagaacgaa
tgggtggtggactacgctctgaagaaaaggaacgtcaaactagttcccacaggacttgac
tttggcaaggaaggtttcaccaggttcagagaacgaagattccacccttctctgcgactc
actcgccgattttatcctcattcccacaatatggacgggttttttgtggccaagctgaag
aagttctccaatgttgttccaaccgaggcagcagggacagaagaagagaattcagaggct
cctgagtcgacagcagttgcagaatctccggagactaaaccatccaaggccaacaaggct
gtccctggaaaagcaggaggcttaaagggaaaagcccaaaccaatggaacaccaggcaag
gagaaggcaaaccagccgaaaggcaaaaaggacttgcccagtggaccaaaaaaggcaaag
atcgccaagatggatgaagagactgtgaaagggtctgaggccaagaagcccaaagcgaag
actaaagcatctaagggcagcaaaaaacaaggggggaaatttgagaaaaagaagggcaag
aaaaaatctcccatgaagtccaagaagagaatgggaaagaataaattcagaaagttgaag
cgcatgttggaaaaaaatgagtga
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