Hippoglossus stenolepis (Pacific halibut): 118113206
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Entry
118113206 CDS
T08308
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain isoform X1
KO
K07375
tubulin beta
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04540
Gap junction
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118113206 (tubb5)
09142 Cell motility
04814 Motor proteins
118113206 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118113206 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118113206 (tubb5)
04147 Exosome [BR:
hsp04147
]
118113206 (tubb5)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118113206 (tubb5)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118113206 (tubb5)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118113206 (tubb5)
Exosomal proteins of colorectal cancer cells
118113206 (tubb5)
Exosomal proteins of bladder cancer cells
118113206 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
118113206
NCBI-ProteinID:
XP_035018587
LinkDB
All DBs
Position
8:18379729..18384301
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEADEDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtgcacatccaggccggccagtgcggtaaccagatcggtgccaagttc
tgggaagtgatcagcgatgagcacggcatcgaccccacagggacttaccatggagacagt
gacctgcagctggacaggatcagtgtttactacaatgaggccacaggaggtaaatatgtt
cctcgggccattctggtggacttggagcctggcaccatggactccgtgaggtctgggccc
tttgggcagatcttcagacctgacaactttgtttttggtcagagcggtgctggaaacaac
tgggccaagggccactacacagagggagctgagttggtggactcagtcctggatgtggtc
cgcaaagagtcagaaagctgcgactgcctgcagggcttccagctcacccactctctgggt
ggtggaactggatctggaatgggaaccctgctcatcagcaagatccgtgaggagtaccct
gaccgtatcatgaacaccttcagtgtggtgccttcccccaaggtgtccgacaccgtggtt
gagccttacaatgccaccctgtcagtccaccagcttgtagagaacacagatgaaacctac
tgcattgacaatgaagctctgtacgacatctgcttccgcactctcaaactcaccacaccc
acctacggagaccttaaccacctggtgtctgccaccatgagcggggtcaccacctgcctt
cgcttccccggtcagctcaatgccgatctccgcaaactggctgtcaacatggtgcctttc
cctcgtctgcacttcttcatgcctggttttgcccccttaaccagcaggggcagccagcag
tatcgtgccctcacagtgcccgagctcacacagcaggtgtttgatgccaagaatatgatg
gccgcatgcgacccacgtcacggccgctatctgaccgtcgccgctgttttccgtggcaga
atgtccatgaaggaggttgacgagcagatgctcaacgtgcagaacaagaacagcagttac
tttgtcgaatggatccccaacaacgtcaagaccgctgtctgtgacattccaccccgtggc
ctcaagatggccgtcactttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctccgagcagttcacagccatgttccgtcgcaaggccttcttgcactggtacacaggg
gaaggtatggatgagatggagttcactgaagccgagagcaacatgaatgatctggtgtct
gagtaccagcagtaccaggatgccactgctgaggaggagggtgaattcgaggaggaggct
gacgaggacgcctga
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