Hippoglossus stenolepis (Pacific halibut): 118113302
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Entry
118113302 CDS
T08308
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118113302 (rbm12bb)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118113302 (rbm12bb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
118113302
NCBI-ProteinID:
XP_035018742
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All DBs
Position
8:13518572..13524087
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AA seq
630 aa
AA seq
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MAVVIRLRGLRVTAGTEDIRKFFTGLKIPDGGVHIIGGERGEAFIIFASDEDARRAMTRS
GNCIKDAPVALLLSSKAEMQSMLERSAENAELDQRRRFEENSRPAKRPFGPEVGRRSGSQ
SGHSPSPKNQRPSNSNDDFSCVFLKGLPFSVTENEVREFFSDLLVDDIVLLKNENGSNNG
RGLVKFATREDANEGLKRDRRYIGSRYIEISMTTANDWHRTTGRPPMVVNRNNFERERSP
IRNQRNPQIHARAQSPMAQMLIAPDDEYCVLLDNLSFTVEKEDIKKLFHHTKLEDDQILH
LMDNEERRTRSSFVLFKNQRDYCEALSQEKRLFFNRWVYTRPISRESMITLLESHCMDAR
PPGNSERLQERPPSSPSDHYESEKQCLFVRNMPLDVRKVEIIDFLFGFNITEDKVFLLLD
HEGAGVGKALVLLRSEAEATRALSLNGQRFLGSEVILKCISRSQMKQLGVDPAMGQEPGQ
ERLLGRSNEASYHSVDKFPDLRMSNDSNISMNNVQVQGGCNYEPFAGGSCAPQDRGNGFR
GDFGPSMQPIDGPTCVKLVNLPFQIRNEEIYDFCYGYSIIPGSVSLQYDQSGRPTGTATV
VFESRPEAVTAVEELTGRPIGPRKIKLLFV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtcatccgtttacgaggcctgagagtcacagcaggtactgaggatattcgc
aagttcttcactggcctcaaaattccagatggaggggtgcatataattggtggggagcga
ggggaagctttcattatctttgcttcggacgaagatgcaagaagagccatgacacggtcg
gggaattgcattaaggatgcccctgttgcactactactcagtagtaaagcagagatgcag
agcatgcttgaaagaagtgcagaaaatgcggagctggatcagaggaggcgatttgaggag
aattcaagacctgctaaaagaccttttggccctgaggtgggcaggagatcaggtagccaa
tcaggtcattccccttctccaaagaatcagaggccttcaaacagtaatgatgacttctca
tgtgtctttcttaaaggattgcctttctctgtgactgaaaatgaagtacgcgaatttttc
agtgatttacttgttgatgacatagtcttgttaaaaaatgaaaatggctcaaacaatggg
agagggctcgtcaaatttgcaacaagagaggatgcaaatgaaggcctgaagagggacagg
agatacattgggtcgaggtatattgagatttccatgacaacagcaaatgattggcatcgc
actactggcagacctccaatggtcgtcaataggaacaactttgaaagggagagatcaccc
attcgcaatcagaggaatccacaaatccatgcccgggcacaatcgcctatggcccagatg
ctcatcgctccagacgacgagtactgtgtgttgttggacaatctgtcctttactgtggaa
aaagaagacataaaaaagctctttcatcatacaaagcttgaggatgaccagatcctacac
ttgatggacaatgaagaaagaagaactagatcttcgtttgtgctgttcaagaatcagcgc
gactactgcgaggccttatctcaagaaaaaagactatttttcaatcgatgggtttatacc
cgcccaatctctagagagagcatgatcaccctactggaatctcactgcatggatgcccgc
ccccctggaaactctgaacggttacaggaaaggcctccatcttcccccagtgatcattat
gagtctgagaaacaatgtctgtttgtacggaacatgccactagatgtaaggaaagttgag
ataatcgacttcctttttgggtttaatatcacagaggataaggtgttcttgctgcttgac
catgagggtgctggggtcgggaaggctttggttcttctccgttctgaggcagaggccaca
agggcactttctctcaatggacaacgcttccttgggtcagaagttatactgaaatgcatt
tcacgctcccagatgaagcagttgggtgttgacccagcaatggggcaggagccaggacag
gagcggctcttgggcaggagcaacgaggcctcctaccactcagttgacaagttccctgac
ctaaggatgtctaatgacagcaatatatcaatgaataatgtacaggtccagggaggatgt
aattatgaaccctttgccgggggctcttgtgctccacaggacaggggtaatggctttcgt
ggtgactttggcccctcaatgcagcctattgatggtccaacctgtgtaaagttagtcaac
ttaccattccaaatcagaaatgaagaaatctatgacttctgttatggatatagcatcata
cctggatctgtgtcactgcagtatgaccagagtggaagacctacaggcactgcgactgta
gtattcgaatctcgtccggaggccgtaacagcagtggaggaactgactggaagaccaata
ggtccaagaaaaataaagcttctgtttgtttga
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