Hippoglossus stenolepis (Pacific halibut): 118113319
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Entry
118113319 CDS
T08308
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118113319 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118113319 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118113319 (gdf6a)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Transforming growth factors (RSTK binding)
118113319 (gdf6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Motif
Other DBs
NCBI-GeneID:
118113319
NCBI-ProteinID:
XP_035018785
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Position
8:3345047..3352510
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AA seq
449 aa
AA seq
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MDASRVVTLYLGLLLVFLGNIPCFQSAAIISPSAPRRNRGARILHQDGQRSSKFLKDIFA
SSHPIVELHKEDPKDSIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGT
DDLLHSPLRRQKYLFDVSTLSDQEELVGAELRIFRRAPGDLQASLQTTGLYDVQVYPCRS
DRLLDSRSLDPLDSTKAGWEVLDVWETFKAHQHHYHHPHHHPHHHHHHHNQQGNQLCLQL
RVTLSKSDTEVDLRQLGLDRSSRSQQEKAILVAYTRSKKRENLFNEMKEKIKSRRTVGKK
DEAAAARAAGEEGAPPRGVRGEGPRRRRRTALSNRHGKRHGKKSKSRCSKKGLHVNFKEL
GWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNSTPPSCCVPTKLS
PISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgagtggtaacgctatatctgggcctgctccttgttttccttgggaat
ataccgtgtttccaatctgctgctatcatctccccctctgcgccaaggaggaacagggga
gcgaggatccttcatcaggacggacagaggtcatccaaattcttaaaagacatcttcgcg
tcgtcgcatcctatcgtggagctccacaaagaagacccaaaggactctattgtgccgcat
gaatacatgctctccatatacaggacatactcggctgcagagaagctcggactaaacgca
agctttttccgctcctcgaaatctgccaacaccataacaagttttgtggacagaggaaca
gacgatcttttgcactctcctctgcgaagacaaaagtatctgtttgatgtctcaaccctt
tcagaccaagaggagctggtcggggcggaattaaggatattcaggagggcgcccggggat
ttgcaggcctccctgcagacgacgggcctctacgacgtccaggtctacccctgccgctcg
gacaggctgctggactcccggtccctggacccgctcgactccaccaaagccggctgggag
gttttggacgtgtgggagacgtttaaagcgcaccagcatcattatcaccaccctcatcat
catccccaccaccatcatcaccatcacaaccagcagggaaaccagctctgcctccagctc
agggtcactctcagcaaatccgacaccgaggtggacctgaggcagctggggctggacagg
agcagccggtcccagcaggagaaggccatcctggtggcctacacccgctccaagaagagg
gagaacctgttcaacgagatgaaggagaagatcaagtcgcggaggacagtgggcaagaag
gatgaggcggcggcggcgagagccgcaggggaggagggggcgccgccgaggggcgtcaga
ggagaggggccccggcgtcggcgcaggaccgcgctgagcaaccggcacgggaagaggcac
gggaagaagtcgaaatcccgctgcagcaaaaaggggctgcacgtgaatttcaaggagctg
ggatgggacgactggatcatcgcgcccctggattacgaggcgtaccactgcgagggggtg
tgcgacttcccgctccggtcacacctggagcccaccaaccacgccatcatacagacgctc
atgaactccatggaccccaacagcaccccgcccagctgctgcgtccccaccaaactcagc
cccatcagcatcctgtacatagactcaggcaacaacgtggtgtacaaacagtacgaggac
atggtggtggagcagtgcgggtgcaggtag
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