Hippoglossus stenolepis (Pacific halibut): 118113348
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Entry
118113348 CDS
T08308
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118113348
03036 Chromosome and associated proteins [BR:
hsp03036
]
118113348
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118113348
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118113348
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
118113348
microRNA pathway
RISC loading complex
118113348
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
118113348
NCBI-ProteinID:
XP_035018895
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Position
8:21524282..21560555
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AA seq
880 aa
AA seq
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MEIGTTGAVGAQSLFTMPRRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVAPAGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMSDRGAGDVSDYKSNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQ
RQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLII
VILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILV
PHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVI
QDLASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQ
PGITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGT
SRPSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVD
KEHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagccgttggggcccagtccctgttcaccatgcctcggcgg
cctggctatggcaccatggggaagcccatcaagctgctggccaactgcttccaggtggag
atccccaagatggatgtctacctctacgaggtggacatcaagcctgacaagtgtccacgg
cgagtcaacagggaggtggtcgactcgatggtgcagcacttcaaggtgaccatctttggg
gatcgcaggccagtgtacgatggaaagaggagcctgtacacagccaaccctctacctgtg
gcacctgcaggggtggacctggatgtcactctaccaggtgagggagggaaagatcgtccc
ttcaaggtgtccatcaagtttgtgtctctggtcagctggcacatgctccatgaggtgctg
accggccgcagcatgcctgagcctctcgagctggacaaacccatcagcaccaaccctgtc
catgcagtggacgtggtcctgcgacacctgccatccatgaagtatactccagtgggccga
tccttcttctcggctccggagggctatgaccatcccctgggaggcgggagggaggtttgg
tttggcttccatcaatctgtgcggcccgccatgtggaagatgatgctcaacatcgacgtt
tctgccactgccttctacaaggcccagcctgtcatccagttcatgtgtgaagtgctggac
atccacaacatagacgagcagccccgccctctcaccgactcgcaccgggtcaaattcacc
aaagaaatcaaaggtttgaaggtggaggtgacacactgtggaaccatgcggaggaagtac
cgcgtctgcaacgtgacccgtcggcctgcgagccatcaaacgttccctctgcagttggaa
aacggtcagacggtggagcgtaccgtagcccagtacttcagagagaagtacaacctgcag
ctcaagtacccgcatttaccctgtctacaagtgggccaggagcagaagcacacctacctg
cccctggaggtgtgtaacattgtagctggtcagcgatgcatcaagaagctgacggataac
cagacctccactatgatcaaagccacagctcgctccgcacccgacagacaagaggagatc
agcaggctggtgcgcagtgccaactacgaggccgaccccttcgtgcaggagttccagttc
aaagtgcgcgacgagatggcccacgtgacggggcgagtgctacccgcccccatgctgcaa
tacggcggcagggtgagcacagagcactttatgagtgatcgtggtgccggtgatgtctca
gactataagagtaaccgcaccgtagccacgcccagccacggggtgtgggacatgagaggg
aagcagttccacaccggggtggagatcaagatgtgggccatcgcctgctttgccacacag
aggcagtgtcgggaagaaatcctgaagggtttcacggaccagctacgtaaaatctcgaag
gatgccgggatgccaatccaaggtcagccatgtttctgtaaatacgcccagggagcggac
agcgtggagcccatgttcagacacctgaagaacacgtacgccgggttgcagctcatcatc
gtcattctgccgggaaagactcctgtctacgcggaggtaaagcgagtgggagacaccctc
ctcggcatggccactcagtgtgttcaggtgaagaacgtggtgaagacgtcccctcagacc
ctctccaacctctgcctcaagatcaacgtgaagctgggaggcatcaacaacatcctggtg
cctcatcaacgaccgtcagtgtttcagcagccagttatcttcttgggagcagatgttaca
catccacctgcgggagacgggaagaagccttcgattgcagcagtggttggcagtatggac
gcccatcccagcaggtactgtgccacagtacgggtccagaggcccaggcaagaggtcatc
caggacctggcctccatggtgcgggagctgctcatccagttctacaagtcaactcgctac
aagcccaccaggatcattttctacagggacggagtttcagaaggccagttcagacaggtg
ctgtattatgagctgctggccattcgtgaggcctgtatcagcctggagaaggagtaccag
ccaggcatcacctacattgttgtacaaaaacgccaccatacccgcctcttctgtgccgac
cgcaacgaaagagttggacgtagtggaaacattcccgctggtactaccgtggatacggac
atcacccatccgtacgagtttgacttttacctctgcagtcacgctggaatacagggcacc
agtcgtccctcccactaccatgtactgtgggatgacaattgttttaccgctgatgagttc
cagctgctcacctaccagttgtgccacacctacgtgcgctgtacccgctcagtctccatc
cctgcgccagcctactacgcccacctggtggccttccgtgcccgctaccatctggtggac
aaagaacatgacagcgccgagggcagccacgtgtctggtcagagtaacggtcgggacccc
caggcgctggccaaagctgttcagattcaccacgacaccctgaggaccatgtacttcgcc
tga
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