Hippoglossus stenolepis (Pacific halibut): 118113450
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Entry
118113450 CDS
T08308
Name
(RefSeq) cingulin isoform X1
KO
K06102
cingulin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118113450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
ODF2_C
CCDC39
Tropomyosin
CCDC18_2nd
Motif
Other DBs
NCBI-GeneID:
118113450
NCBI-ProteinID:
XP_035019067
LinkDB
All DBs
Position
8:complement(16075153..16090980)
Genome browser
AA seq
1213 aa
AA seq
DB search
MSTPSSGRKTPVDYGVQIRFINDLCDNGGGQPGTQPKTKTQASSKYGVAVRVQGIAGQPY
VVLKDGEKGDSYGVQLKTQPISGYSSLPRRRENAEPGTQGANVGGGRGGGQEGALRRAQS
HGSLLDRDGEEGADNEDFQLSRPPGDGKSGSYGNLDGGLGVRGEREQPQHVSGRGGPMER
NKWGGSYQTGLNGSSGSVRGSQTYPDPPQQTNDYQSNQRQTAVNRPVNRFDGVNRGDQQR
GLLPPQQDPRATSPLHSPHPYTSPPSSTHSSLGRSQHAVTSFPGHSANQWPLPGREAAVV
TPQASLTETQVTPDLLLDQAQSAEMSGEEEQVMQTIYNILRQGTNESDVVIRHRVKLIVQ
KIQNIKPKESQREEWMREKKELERKTAELQTALQAGKRDSDPALKAELESCLDENLQLRE
MLDRKKIELNETQSELTQLRMDRENAEARVRDMEDQLAELQDELRRDNGNKTDLVSSQAQ
LMEVCQLKHKLEETLRQRERELTALKGALKEEVATHDKEIEALREQYSADMEKLRSSMEQ
VSQSHAGIESERVRVNASVRSLQQQLEDCRDESGHWMEQFHSTRDELRTTKQEEPPITPG
APLLQARLEKEEFEEELKELQERVSTMKQQIPDPIHTQSLNQELQRYNADLQKAKTEVEK
HRTEFDRKVMEVISIKKTHQNQEAELKYEIDRLKGQLQRAKEDCAKAQEKNKQLPDPSTI
SELEQKLVEAGMEANQLKEKLSLAEEEVESRKTQISRAQMDLKSLQDSQQEQKDATARLK
EKLSRLEAQLQTSTTESSETELALHSEVRGLRSELDEAKRKASKLSQEHRERSLRLEDTE
KEKETLKESINQLEEAKRQQERALGKLNKEHESLTMSSREEAQALRVQLEEQRDRARKEM
HEVQRHGNDAETELERSHTNLKRLEEEMSRQKKEILLVCEERDNHQLDKELLTNRLRHLE
GEMEASKNNHNEKTREIRILEDKLKRMELELEEERSSAEMITERMTRSRDQIDQLRSELM
QERSSKQDLELDKNTMERHLKELRSRVVDMEGQSRSSAGVSQLENKILELEERLRSEERD
KNSVLASQRRLERKLKDLSMMLDEERQTHTEQRDQFALRVKALKRQVDEGETELERIDGL
RRKAQRDMEEQMEFKDALQTRVTALEVELKRKAQAAMRPALDSALSSDDDDSFYDPTNIT
SILTEGNLQTSSC
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaccatcctcaggccggaagaccccagtggactacggcgtccagatccgcttc
atcaatgacctctgcgacaatggcggcgggcagcctgggacccagcccaagaccaagact
caggcctcctccaaatacggtgtggcggtcagggtgcagggtatcgctggccagccgtat
gtggtcctgaaggatggagagaaaggagactcatatggggtccagctcaagacccagccc
atatctggctacagtagccttccacggcggagagagaatgccgagccaggaacacagggg
gcaaatgtaggaggaggaagaggaggagggcaagaaggggcactacgccgggcccagtcc
catgggtcactgttggacagggatggagaggaaggggcagacaatgaggatttccagctg
tcgaggccaccaggggatgggaagtctggtagttatgggaacctggatggaggtttaggt
gtaagaggagagagagagcagcctcagcatgtcagtggtagaggtgggcccatggaaagg
aataaatggggtggttcttatcagacagggctcaacgggtcatcggggtcagtgaggggc
agtcagacctaccccgaccctcctcaacaaacaaatgattatcagtctaatcagagacaa
actgctgtaaacagaccagtaaacaggtttgatggtgtaaacagaggggaccagcagaga
ggcctccttcctccacaacaagatcccagagcaacatcacctcttcacagcccccacccc
tacacctcaccaccgtcctccactcacagcagcttgggacgcagccagcacgctgtcacc
agttttcctggacactctgcaaaccagtggcctttaccagggagagaagctgctgtggtg
acaccgcaggccagcctcactgagacacaggtgacccctgaccttttgctggaccaggct
cagagtgcagagatgagcggtgaggaggagcaggtgatgcagaccatatacaacatcctg
aggcaaggaaccaatgagagtgatgttgtcatcaggcacagggtcaagctcatcgttcag
aagattcagaatataaagcctaaagaatcccagagggaagagtggatgagagaaaagaag
gagcttgagagaaagactgctgaactacaaactgccctgcaggcaggaaagagggactct
gatcccgccctgaaagctgagctggagtcctgtctggatgaaaacctgcaactgcgggag
atgctggaccgaaagaagatagaattaaatgaaacacaatcagagctgactcagctcagg
atggatagggagaatgcagaggcacgagtcagagatatggaggaccagctggccgagctt
caggacgagctgagaagagataacggcaacaagacggacctggtatcttctcaggcccag
ctgatggaggtctgccagctgaaacacaagctggaggagacactgagacagagagagagg
gagctcacagctctgaaaggagcactaaaggaagaggtggccacacatgacaaagagata
gaggccctcagagagcagtacagtgcagacatggagaagctccgcagcagcatggagcag
gtgtctcagtctcatgcagggatcgaatccgagcgtgtgcgtgtcaatgcatcagttcgc
tctctacagcagcagttggaggactgtcgagacgagagtggccactggatggagcagttt
cactccaccagggatgaacttcgaacaactaaacaagaagagccacccatcactcctgga
gcaccactcctgcaagctcgtctggaaaaagaggagtttgaggaggaactgaaggagctc
caggagagagtgagcaccatgaaacaacagataccagaccccatccacacccagtctctc
aaccaggagctccagagatacaatgctgatctgcagaaggcaaagactgaggtggaaaag
caccggacggagtttgacaggaaggttatggaggtcatctccataaagaaaactcaccag
aaccaagaggcagagttgaagtatgagattgacaggctcaagggccaattgcagagggct
aaagaagactgtgccaaggcacaggagaaaaataagcagctcccagacccatccaccatc
tcagagctagagcagaagcttgtggaggcaggtatggaagctaaccagctcaaagagaaa
ctctcattggctgaagaggaagtggaaagcaggaaaacacaaatcagtagagctcagatg
gacctgaagtcgcttcaagattcccagcaggagcagaaagacgccaccgcacgtctcaaa
gagaaactctcacggctagaggctcagctgcagaccagcaccacagagagctcagagaca
gagctcgccctccactctgaggtgagaggcctgagatctgagctagatgaggccaagaga
aaagcctccaaactgagccaggagcaccgtgaacgcagcctgcgcctggaggatacagag
aaagagaaggagacactcaaagagagcatcaaccagctggaagaagccaaacggcagcag
gagagagctctggggaaactcaacaaagagcacgagtctctgaccatgtcctcaagggag
gaggcacaggctctcagggttcagctggaggagcagagagacagagcacgcaaggaaatg
cacgaggtgcagcgtcatggaaacgacgcagagactgagctcgaaagaagccacacaaat
ctaaagagactggaggaagaaatgtcacggcagaagaaggagatcctgcttgtgtgtgag
gagagagacaaccaccagctggataaagagcttctcaccaacagactgcgccaccttgag
ggagagatggaggccagcaaaaacaaccacaacgagaaaacccgggagatccggatcctg
gaggacaagctgaagcgtatggagttggagctggaggaggagagaagcagtgcggagatg
attacagagcggatgacgaggagcagagaccagatcgatcagctccgctctgagctcatg
caggagaggtcctccaaacaggacctggagctggacaagaacaccatggagagacatctg
aaggagctgaggagtcgtgttgttgacatggagggccagtctcgctcctcagccggagtc
tctcagctggagaacaagatcctggagcttgaagaacgcctacgcagcgaggaaagggat
aagaactctgtcctggcatctcaacgtcgtctggagaggaaacttaaagacctcagtatg
atgctggatgaggagcgacaaacacacactgaacagagagaccagtttgctctgagggtg
aaggctctgaagaggcaggtggatgaaggagagacggagctggaaaggatcgatggtctc
aggagaaaagctcagagagacatggaggaacagatggagtttaaagacgccctgcagacc
agagtcacagctctggaggttgagctcaagaggaaagctcaggcagcaatgcgtccagct
ctggattcagccctgagctcagatgatgacgacagcttctatgacccgaccaacatcacc
tccatcctcactgagggcaacctccagaccagctcctgttga
DBGET
integrated database retrieval system
