Hippoglossus stenolepis (Pacific halibut): 118113452
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Entry
118113452 CDS
T08308
Symbol
si:dkey-92i15.4
Name
(RefSeq) uncharacterized protein si:dkey-92i15.4
KO
K22628
interleukin 16
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118113452 (si:dkey-92i15.4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hsp04052
]
118113452 (si:dkey-92i15.4)
Cytokines and neuropeptides [BR:
hsp04052
]
Cytokines
Interleukins
118113452 (si:dkey-92i15.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_2
PDZ_6
PA-IIL
Motif
Other DBs
NCBI-GeneID:
118113452
NCBI-ProteinID:
XP_035019072
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Position
8:complement(16043888..16052242)
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AA seq
1104 aa
AA seq
DB search
MDLPFLPTPVSKCDTRTGAQFTVRSANSPSYSFTRRPGVRRSKGFIEEVREGTEGDEERE
RRGTDPYTNGTNKEEDGVSQYQDSTGGRSSVKGQREEKETLGHETSTKLNQNGTGDKTTT
ESGTDRSENPAFESRGRTEWRRYNLSGRSKSVDLGAEAKSPVRGTRADMLSTSRGGDVTK
QLGGLDERRTGAEAVRNRVMSSTHTYSSAGRTNVVQERSPVSHLSQTLVRVSKGHSLPSR
LRSQSGPSSRFTETASSLGPKGGQSIMERIEKLYGSTGVSKAEDNSKIRDFSTSATSADS
FISSHRSYERGAGGTFPRGFSLGEKNSLSPMQSIRSSPWTPQKDTSGSESSLSPGRSRRL
SGGLWQGPVQGRYPPEGGANLGKGLVDIGTMSLDRARSRNTVAAQIRSARAAAGFTAPTP
FLEEETSAGLKDSSGFTERGMNGKCDQGWVNDGKETNGVKGIKEKTELKSSTDEDVFESS
PNKTTPKKNFSAPASVRNKISQFEALTQRAQGLATGHILMPRRAFSVPTQLSRGHDGVKK
SGSAKAIGGLRDKWEDLKEGGEAPNKPDDKGTGAGKKLLLERFLSADGVGLERKEKGGVD
LAESERIADSGDNLSEDFGKYSKLKSSLELPLNGGRRKTFFIDETDFAKVSSPEEASEKD
VTANNTPTPLLSNSSDISTNVASSPVSDDGEIPTNTPNHSPVNSPTAEPGKTSPIADRHD
STSTAKSPDPDSSPPPRPLATSSHSNLLDLVSSEVTTAQQRGRKPVLGLDSWVAGLNSAI
KVWNDDGDYEDDDESTQKDEDSNYDSDSGESSVTVTSNMSQSDNRSFCVSLSELCNFAGV
DCESDNDSDEWQSRGRRSASLSSDVSALSCVSVMPSEELDRLLEDVRSLGDNTLQDYDDV
QVAVLHKEVGVGLGFSVAGGVDQSKPVTVHRVFHPGVASKEGSIMEGDQVLSINGTALNG
YTHWEVLRVLRRAKARETGVVVLRRGGISDVSKSGVQTSTPGPTQTQFTDDGQHMCVCLE
KNSRDLGFSLEGGVGSSLGNRPLTVQKIFQGGPVDKVCPGDEILEIEGVSVVGMRRLEAW
TLIRKLPSGTVDVVLSRPLKHLET
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggacttgccatttctcccaactccagtgagcaagtgcgacacgcggacaggggcgcaa
tttactgtccgctcggccaactctccctcgtacagcttcacccgcagaccaggtgtcagg
agatccaaaggttttatagaggaggtgagggagggtactgaaggagatgaagaaagagag
agacgtgggacagatccttacacaaatggtacgaataaggaagaggatggagtctctcaa
tatcaagacagcactggtggtcgtagcagtgtcaaaggtcagcgtgaggagaaggaaaca
ttaggccatgaaacgtccaccaagctgaaccagaatggcacaggagacaaaacgaccaca
gagtccggcaccgacagaagtgaaaaccctgcgtttgagagtcgaggcaggacagagtgg
aggagatacaacctgtcaggcagaagtaaaagtgtggatttgggagcagaggcgaagagt
cctgtccggggaaccagagctgacatgttgtcaaccagcagaggaggggacgtcactaaa
cagcttggaggcttggatgaaagacggaccggagctgaagctgtgaggaacagggtgatg
tcttcaacacacacctacagctctgcaggtcgaactaatgttgttcaggagaggagcccg
gtgagtcacctgagccagacgttggtcagggtcagcaagggtcattctctcccctccagg
ctgaggtcccagtctggaccaagctccaggttcacagagacagcttcatcactcgggccc
aaaggaggtcagagtataatggagaggatagagaaactctacggatctactggtgtcagt
aaagctgaggataacagcaaaattagggacttctccacctctgctacatctgcagactcc
tttatttcatcacacaggtcatacgaaaggggagctggggggaccttccccaggggtttc
tcattaggagagaaaaatagcctcagtccaatgcaaagcatcagatcttccccctggaca
cctcagaaggacacgtcaggttctgagagttcactttctccagggaggagcaggagattg
tcagggggactgtggcaggggcctgtccagggcaggtatccaccagaaggtggagccaac
ctggggaaggggttggtggatataggcacaatgtctctggatagagcgaggagtaggaac
actgtcgcagctcagattagatctgccagggctgcagcagggtttactgcaccaactcct
ttcttagaagaagagacatcagctggtctcaaagattcatctggattcacagagagaggc
atgaacggaaaatgcgatcagggctgggtcaacgatggaaaggaaactaatggagtaaaa
ggtattaaagaaaaaactgaactgaagagcagcactgatgaagatgtatttgagtcaagt
ccaaataaaactacacccaagaagaacttctcagctccagccagcgtgaggaataagatc
agccagttcgaggctctgacacagagagctcagggtttggcaacaggacatatcctgatg
cccagacgagctttctctgtgcccacgcagctcagcaggggccatgatggcgtgaagaag
agcgggtcggcaaaagcgataggtgggttgagggacaagtgggaggatttgaaagaggga
ggggaggcgcccaataaacctgatgacaaagggacaggggcagggaagaagctgctgtta
gaaaggtttttatctgcggacggggtcggactagagaggaaagagaaaggaggggttgat
ttggctgagagtgaaagaatagcggatagcggagacaacctttctgaagattttggcaaa
tattccaaactcaagagttcacttgaactccctctgaatggaggacgccgtaaaacgttt
ttcatcgatgagacggatttcgccaaagtctcaagtcctgaggaagcaagcgagaaagac
gtgacagccaacaatacaccaaccccgctactgtctaattccagtgacatatcaactaat
gtggcgtcttcacctgttagtgatgatggcgagatcccgacaaacacccccaaccactcg
cctgttaattcacctactgcagaaccaggaaagacctcccccattgcagatagacatgac
agcacttccaccgccaaatctcctgatccagactcctcccctccacctcgtcccctcgcc
acctcctcccacagcaacctccttgatctcgtgtcttcagaggtcaccaccgcccagcag
agagggaggaaaccggtgctgggccttgactcttgggtagcaggcttgaactcagccatt
aaggtgtggaatgacgacggagattatgaggatgacgacgaaagcacgcagaaggatgag
gattccaactatgattcagattcaggagagtcctctgtgaccgtcaccagcaacatgagc
cagtcagataacaggagcttctgcgtcagtctttcagaactgtgtaactttgctggggtt
gactgcgagtcagacaacgacagtgatgagtggcagtcgagaggtcggaggtcggcctca
ctgagctcagatgtgtcggctctgtcctgcgtgtcagtgatgcccagtgaggagctggac
cggctgctggaggatgtccggagcctgggggacaacacgctgcaggactatgatgatgtg
caggtggctgttctccataaggaggttggagtgggactgggcttcagtgtggcaggaggc
gtggaccagagcaagccagtcactgtccatagggtctttcacccaggcgtggcatctaag
gaaggctccatcatggaaggggaccaggtcttgtcaatcaacggcacagcgttgaatggc
tacacccactgggaggttctgagggtgctgagaagggcaaaggctcgtgagacaggagtg
gtggtcctgaggaggggaggcattagcgacgtctccaagagtggagtgcagacaagtact
ccgggaccaacacagacccagttcactgatgatggtcagcacatgtgtgtttgtctggag
aagaacagcagggacctgggcttcagtctggagggaggtgtaggctccagtctggggaac
agacctctcactgtacagaagatcttccagggcggtccagtcgacaaggtgtgtcccggc
gatgaaatcctggagattgagggtgtgagcgtggtggggatgaggcgtctggaggcttgg
accttgatcagaaaactcccctctggtaccgtggacgtggtactgtcccgccctctgaaa
catctggaaacgtga
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