Hippoglossus stenolepis (Pacific halibut): 118113479
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Entry
118113479 CDS
T08308
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118113479 (ascc3)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118113479 (ascc3)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118113479 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
118113479
NCBI-ProteinID:
XP_047196714
LinkDB
All DBs
Position
8:6516972..6645250
Genome browser
AA seq
2202 aa
AA seq
DB search
MSPPRLTGALRSFSHVSKKEHLTEQPYDLKTKRLKRQELFAREGLTWQKIVHFCTEHQDK
AEHQAASQELKSFLLAAKQIVGDEHGQEAIESAAVFLFETFHNKDHVGTEETRAIRQMFG
PFPSAAAESSCASVARLVASLGNSQVEDFIQTHTSHHNPQRGSAFGRNIVFSYDCYTLDP
LEGLPLSAPHEENISLDFINFLNNQQSGRKATSEEEVSSSGRSTGSGDGATLRMEVEKYL
NRGNMISSSPEELCTSLFEMLASHKSDDELQNELFELLGPDGLEMISTLLQRRMAIVDSL
LTLPSDRIGFPPDLSQKGEMKPIYGCQVTIQSEQEKQMMKNYRREEKRERKKGKGTDDGD
ISDAFMPFDPREMRAHREQALLTARREPVLGRERVYQRIQYPNVYDVYTEATNMPAFVGG
ARILLPEGIHRENNKMYEQVEIPPSEAMPIGFEEKPIYISELDEIGQLVFKGMKSLNRIQ
SVVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKIVYVAPMK
ALAAEMTKYFSKRLEPLGISVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDAS
LSQIVRLLILDEVHLLHEDRGPVLECLVARTIRQVESTQSMIRILGLSATLPNYLDVASF
LHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLHDMEEVCYNKVVEQVKAGHQVMV
FVHARNATVRTALGMIEMAKNVGEITFFQPNQGADYGQCEKQIQRSRNKQMKEMFPEGFG
IHHAGMLRSDRSMMESMFSKGYLKVLVSTATLAWGVNLPAHAVIIKGTQIYDAKRGALVD
LGILDVMQIFGRAGRPQFDKYGEGTIITSHDKLSHYLTLLTQQNPIESQFLDNLADNLNA
EIVLGTVTNVEEAVKWLSYTYFYVRMRANPLAYGINHKAYQMDPSLELYRKELVVESGRK
LDKARMIRFEERTGYFGSTDLGRTASHFYIRYNTIETFNELFNSQRTEADVFSIVSKAEE
FEQLKVRDDETEELEQLLYNNCELQAAGGVENGYGKVNILLQTYIGRGEVDSFSLISDLS
YVAQNAARIVRALFEIALRKRWPAMTYRLLTLCKVIDKRLWSFAHPLRQFPNLSHIVLNR
LEEKKLTVDKLKEMRKDEIGHMLHHVNIGLSVKQCVHQIPSITMEANIQPITRTVLRIRL
LVTPDFHWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTAEPQHIVFTIPIF
EPLPSQYYIKAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNPQFES
LYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNEYPTSKVVYIAP
MKALVRERIEDWKVRIEQQLGKKVVELTGDVTPDMRSIAQADLIVTTPEKWDGVSRSWQN
RSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARDLA
DWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI
FVSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIATVRDSNLKLTLAFGIGMHH
AGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTKRYVDYPI
TDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEIA
AGTISSKQDAMDYITWTYFFRRLVMNPSYYSLEDIGHESVNKYLSSLVEKSLRDLECSYC
MEIHEDDRTIVPLTYGRIASYYYLRHQTIRMFKERLKAEMPIHELLSVLTEAEEYAELPV
RHNEDQLNSQLAQQLPLQVNPHSFDSAHTKTHLLLQAHFSHAQLPCSDYTTDTKTVLDNA
IRICQAMLDVAANEGWLVAAIGICNLVQMIIQGRWLHDSSLVTLPHVEQQDLYLFRKWAN
RKERRDRGGYNGPIEGLPELIAACNGKESVFAAIVGQDFNSSQIAQAWSFLSHLPVLEVE
MSVKGWWEEKQEQTEIRLPAAGANLRDESRWLRVHADQEYVLHVSLRRINLGQQRRKQDS
KAQAPRFPKAKDEGWFLILGEVDRKELLAVKRVGYVRNRMSVSVAFYTPEKTGKCIYTLY
LMSDSYLGVDQQYDIHLNVTPASIAAQVNTEVSDSVTDQRRS
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacctcggctcaccggtgccctgcgctccttctcccatgtcagcaaaaaggag
cacctcactgaacagccctacgatctcaagaccaaacgtctgaagcgacaggagctgttt
gccagagagggcctgacttggcagaagattgtccatttctgcaccgagcatcaggacaaa
gctgagcaccaagctgccagtcaggaactgaagagcttccttctggcagccaaacagatt
gtgggggatgaacacggtcaggaggccattgaaagtgctgctgtctttctgtttgagacc
ttccacaacaaagaccatgtgggcacagaggagacccgggccattagacagatgtttggc
ccctttccgtcagctgcagccgaatcctcctgtgcctctgtggctcggcttgtggcttca
cttggaaactcccaagttgaagattttattcagacccacacctcccatcacaacccacaa
cggggctccgcttttggacgcaacattgtcttctcatatgattgctacacattggaccca
ctggagggcctgcccttgtccgctccccatgaggagaacattagcctggactttatcaac
tttctaaacaaccagcagagcgggaggaaggccaccagtgaggaggaggtgtccagctca
ggcagatctaccggctctggggatggagctaccctaagaatggaggtcgagaagtacctg
aacagaggcaacatgatctcatccagcccagaggagctgtgcacatccttgtttgagatg
ctggcctcgcacaagagtgatgatgagctacagaatgagctgttcgagctgctgggacca
gatgggctggagatgatctccaccctcctccagcgaaggatggccatcgtcgactccctc
ctcactctcccatccgataggattggcttcccaccagatctgagccaaaaaggggaaatg
aagcctatctacgggtgccaggtgaccatccagtcggagcaggaaaaacagatgatgaag
aattaccgcagggaggagaagagagagaggaagaaaggcaaaggaacagacgatggcgac
atctcggatgcttttatgcccttcgaccccagagagatgagagcccaccgggagcaggcc
cttctgactgcacgacgtgagcctgtactaggcagagaaagagtgtaccaacgaattcag
tatcccaacgtctacgacgtctacacggaggccacaaatatgcctgcatttgttggagga
gccaggattttgctccctgagggaatccacagagagaacaataagatgtatgaacaggtg
gagatcccccccagcgaggccatgcctatcggctttgaagagaagccgatctacatctct
gaactagacgagatcgggcagctggtgttcaaggggatgaagagtctgaacaggatccag
tccgttgtctttgagacggcctataacaccaacgaaaaccttctgatctgcgctccaact
ggcgccggcaagaccaacatcgccatgctgactgttctccacgagatccgccagcacctg
cagccaggcggtgtcatcaagaaggacgaattcaagattgtatatgtggctccaatgaag
gccttggcagcggagatgactaaatacttcagtaagcgattggagccactgggcatctct
gttaaagaactcactggagacatgcagctaaccaaaggagagatccttcgaacacagatg
ttggtgacgactccagagaagtgggatgttgtgaccaggaagagcgtcggagatgcctct
ctctctcagattgtgcgactgctgatcttggatgaggttcatctcctccacgaggatcga
ggtccggtactggagtgcctggtggcgaggaccatcagacaggtggagtccacccagagt
atgatcaggatcctgggactatcagccaccctgcccaactacctggatgtggcctcattc
cttcatgtcaacccttatattggcctcttcttcttcgacagtcgcttcagacctgtgccc
cttggacagacctttgtaggcatcaaaagcaccaacaagatccagcagcttcatgacatg
gaggaggtttgttacaacaaagttgtggagcaggttaaagccggtcatcaggtgatggtg
tttgtccacgcccgtaatgctacagtgaggacggccttgggaatgatcgagatggcaaag
aacgtcggagagatcaccttctttcaaccaaaccagggtgcagactatggccagtgtgag
aaacagatccagcgctccagaaacaagcagatgaaggagatgttcccagaaggctttggg
atccaccatgctggcatgctgcgttctgaccgcagtatgatggagagcatgttctccaaa
ggctacctcaaggtgctggtcagcactgccacactggcctggggagtgaacctgccggcc
catgcagtcatcatcaagggcactcagatctacgacgccaagcgcggtgccctagtggat
ctgggtatcctggatgtcatgcagattttcggccgtgccggtcgtcctcagtttgacaag
tacggcgagggcactatcatcacttcccatgataagctgagtcattacctgaccctgctg
actcagcagaaccccatcgagagtcagtttctggacaacctggctgacaacctcaacgct
gagattgtgttggggacagtcaccaacgtggaggaggcagtgaagtggctgagttatacg
tacttctatgttcgcatgagggccaacccactggcatacggcatcaaccacaaggcttat
cagatggatccgtccttggagctgtacaggaaggagctggtggtggagtctggcaggaag
ctggacaaggcgaggatgatccgctttgaggagcgaaccggctacttcggatccactgac
ctaggaaggaccgccagtcacttctacatcagatacaacaccatagagacgttcaacgag
cttttcaactctcagcgaacagaagctgatgtcttcagtatcgtgtccaaggccgaggag
tttgaacagctaaaggttcgtgatgatgagacggaggagctggagcagttgctgtataac
aactgtgagctgcaggctgcaggcggcgtggagaacggctacggcaaggtcaacattctg
ctgcagacgtacatcggccgtggggaggtggacagcttctcgctcatctcagacctgtcg
tatgtggcacagaatgctgctcgaatcgtcagggcgttgtttgagattgctctgaggaag
cggtggccggccatgacctaccgacttctcaccctgtgtaaagtgatcgacaagcggctg
tggagcttcgcccaccctcttcgccagttccccaacctgagtcacattgtgctgaaccgc
ttggaggagaagaagctcactgtggacaaactgaaggagatgagaaaggatgagattggt
cacatgctgcaccacgtcaacatcggcttatcggtcaaacagtgcgtccatcagatcccc
tcgatcaccatggaggccaatatccagccaatcacgcgcaccgtcctgcgtatccgtctc
ctcgtcacaccggacttccactggaatgatcaggtccatgggtcagtgggggagccatgg
tggttgtgggtggaggatcccatcaatgatcacatctaccactcggagtacttcctcctg
cagaagaaacaggtagtaacagcggagccgcagcacatcgtgttcaccatccccatcttt
gagccattgccctctcagtactacatcaaggcagtgtctgaccgctggctcggggccgag
gccgtttgcatcatcaacttccagaacctcatcttacccgagagacaccccccgcacaca
gagcttctggacctgcagccgttgccggtgacggctctgggtaaccctcagttcgagagc
ctgtacaagttcactcacttcaaccccatccagacccagatcttccacacgctgtaccac
accgacactaatgtccttctgggggcgccaacaggctctggaaaaaccatcgctgcagag
atggccatgtttcgggtgttcaacgaatatccgacctctaaggtggtgtacatcgcccct
atgaaagccctggtgagagaaaggattgaggactggaaggtcagaattgagcaacaactt
ggaaagaaagtggtggaactgacgggtgacgtgactccagacatgagatctatcgcgcag
gccgacctcatcgtcaccacaccggagaagtgggatggagtgagcagaagctggcagaac
cgaagctacgttcagaaagtggccattctcatcatcgacgaaatccacctgcttggtgag
gacagaggtcccgtgttggaggtcattgtgtccaggaccaacttcatctcctctcacacg
tctaagagtgtgcgagtggtcggtctgtccacagctctggccaacgctcgagacctcgcc
gactggctaggaattggacaggtgggtttgtttaacttccgtccgtctgttcgccccgtg
ccgctagaagttcacatccacggtttcccaggacagcactactgcccccgcatggccagc
atgaacaagcccaccttccaagcgatacgcagccactcccctgccaaaccagtgctgatt
tttgtctcatcgcgacgacaaactcgactgaccgccctggatcttatcgcctacctggcc
acagaggacaaccccaaacagtggctgcaccaggacgagagagagatagaggacatcatc
gccacagttagagattccaacctgaaactgacgctggcatttgggatcggcatgcaccac
gcaggcctgcatgagagagaccgcaagactgtggaggagctgtttgtcaactgtaagatc
caggttttgattgccaccagtactctggcttggggggtgaacttccccgctcacctggtg
gtcgtcaagggaactgaatacttcgatggcaaaaccaaacgctacgtggactaccccatc
acagatgttctgcagatgatgggtcgagcaggtcggcctcagtttgatgatcagggaaaa
gcggtaattctcgtccatgacatcaagaaggatttctacaagaagttcctctacgagccg
ttccctgtggagtccagcctcctcagcgtgctgtcagaccatctgaatgctgagatcgct
gcaggaaccatctcatccaaacaggatgcaatggactatatcacctggacatacttcttc
agacggctggtgatgaatcccagttactacagccttgaagacataggccacgagtccgtt
aacaaatacctgtccagcctggtggagaagagcctgcgggacctggagtgctcttactgc
atggagatacatgaggacgatcggaccattgtgccactgacttatggacgcattgcctcc
tattactacctgaggcatcagaccatccgcatgtttaaagagcggctgaaggctgagatg
cccatccacgagctgctctccgttctgacggaagcagaggagtacgccgagttgcccgtc
agacacaacgaggaccagctgaacagccagttggcgcagcagctcccactgcaggtcaac
ccccactccttcgacagcgcccacaccaagacccacctgctgctgcaggcccacttcagc
cacgcccagctaccgtgcagcgactacaccaccgacaccaagacggtgctggacaacgcc
atccgaatctgtcaggcaatgctggatgttgctgcaaatgaaggctggcttgttgcagcc
atcggcatttgcaacctggtacagatgattattcagggtcgctggctgcacgactcctca
ttagtgacactgccacatgtggaacaacaagacctctatctgttcaggaagtgggcaaac
aggaaggagaggagggacagaggaggctacaatggaccaattgaaggacttcctgagctg
attgccgcctgcaatggaaaagaaagtgttttcgctgctatcgtcggacaagacttcaat
tcaagtcagattgcccaggcttggtccttcctgagtcatctcccagtgctggaggttgag
atgagtgtgaagggctggtgggaggagaagcaggagcagacggagatccgtctacctgca
gctggagcgaacctgagagacgagagccgctggctgcgtgtccacgctgaccaggagtac
gtcctgcacgtgtcactgagacgcatcaacctgggccaacagaggaggaagcaggacagt
aaggcccaggctcccaggtttcccaaggcgaaggatgaaggctggttcctgatattgggg
gaagtggatcgcaaggagctgctggcggtcaaacgggttggatacgtgcgcaaccgcatg
tccgtgtcggtggccttctacacaccagagaagactgggaagtgcatctacacgctgtac
ctgatgagtgacagctacctgggtgtggaccagcagtacgacatccacctgaatgtaacg
cctgccagcatcgcggcccaggtcaacacagaggtgtccgactcagtgaccgaccagcgc
cgcagctga
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integrated database retrieval system
