Hippoglossus stenolepis (Pacific halibut): 118113485
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Entry
118113485 CDS
T08308
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118113485 (rnf115a)
04121 Ubiquitin system [BR:
hsp04121
]
118113485 (rnf115a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118113485 (rnf115a)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118113485 (rnf115a)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118113485 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
C1_2
zf-RING-like
zf-C3HC4_3
Rad50_zn_hook
HypA
Motif
Other DBs
NCBI-GeneID:
118113485
NCBI-ProteinID:
XP_035019125
LinkDB
All DBs
Position
8:complement(16598992..16606052)
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AA seq
315 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGANGIDDTAT
QFAELWHLLLLERPFTTDNDTPDSEPRLPGGRLGGLSDLGGLGGGPIGGSVPAGLGGPMG
GLLGAGDHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVSSSPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVNISQEQADCC
MECPVCKEDFTVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSLNGEDSSSQPPSES
PSLSMDPRTQERWSF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcgatttttctgccactgttgtaaaggagaa
gtcaatcccaaactgccggagtacatctgtccgagatgtgattcagggttcatagaggaa
gtaacagaagactccagtctcctagagggtggtgcaaacgggatagatgacacagccaca
cagtttgcagagctatggcacctgttgttactggagcggccatttacaacagacaatgac
acccctgactcagaacctcggctccctggaggacggctgggaggtctcagtgacctgggg
gggttgggagggggaccaatcggggggtcagtcccagcaggccttgggggacctatgggg
ggtttactaggagccggggatcactggggaccgggacgcccacctcgcctgcacagccag
agaagataccggtctagaggcagcagcaggcctgaccgctcgcctgctgtggaagggatt
gtgcaacagtttcttgctggcctctttgccaactctggagtctccagctcacctccgctc
tcatggacagggatgctgcactctaaccctggggactacgcctggggacagggagggtta
gacgctgtgataacacaactactaggtcagctggaaaacacaggacctcctccagcagag
aaagagaagatctcttctctcccgactgtcaatatatctcaggaacaagcagactgctgt
atggaatgtccagtgtgcaaagaggacttcacagttggagagccagtcagacagttaccc
tgtaaccacttctttcattcagactgtatagtgccatggctggaaatgcatgacacatgt
ccagtgtgtaggaagagtttgaacggtgaagacagcagcagccagcccccatcagagtcc
ccctccctctccatggaccctcgcacacaggagagatggtccttctga
DBGET
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