Hippoglossus stenolepis (Pacific halibut): 118113500
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Entry
118113500 CDS
T08308
Symbol
bcam
Name
(RefSeq) basal cell adhesion molecule isoform X1
KO
K06578
Lutheran blood group glycoprotein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hsp04090
]
118113500 (bcam)
CD molecules [BR:
hsp04090
]
Proteins
118113500 (bcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_4
C2-set_3
Ig_6
C1-set
Insulin_TMD
TMEMspv1-c74-12
DUF3377
S1FA
Orf78
CD34_antigen
Psg1
Protocadherin
DUF6377
Motif
Other DBs
NCBI-GeneID:
118113500
NCBI-ProteinID:
XP_035019159
LinkDB
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Position
8:complement(19439259..19490220)
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AA seq
617 aa
AA seq
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MDGIMFGRASLLCTLLWALLVCCAAVTVMVPPKVEVLKGETVKLPCTFTDAPPSGNTIVE
WYMEEQGARKRVAFRPQGGDAKIDEGTQLTGRVSMGEDFSLTITSSQPSDELLFYCQVLA
GTAGVADASTMLKVFWAPEKPVLTRPSSQAISVGETTSSEISACVTMNGHPQPRIIWFKD
AQPLPEYKDRKEKTFMVPSMVKEASGLFTMKSTLYMQPTKADKDAVFQCTVEFSMPGDQI
KQKTSDTITINLNYPSEIATFSLVNTDAVKEGDTVTMKCETDGNPQPEFDFTKNGQVIIG
QGGLLTLKSVKRTDTGLYKCSATDFDNIDADLSGTINLNVHYIDPVNVTPVKPQVVMVGD
KVEWQCKTKASAVHTVQWKKGSDVLSQDGTLSIQAVSYDKAGEYMCVGAVPSVPGLTAEY
SVNLTVKGKPMIEAPAAGEVVKEGDMVSLKCSAYGYPAPQFTWKPSGKESVSVEGNKVVS
TMTLQTTAEILKAGVTCEVTNEHGADSKSFPVSLKRAIDNSADRVLLSGNPVLTSADKQQ
GGSSGVVIAVVVCVLLLLLLVALIYFLNKKRKLPCSKKDKKEVASGEVNNDIVVEMKTDK
ANEEAGLLNKRPSTEQC
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacgggataatgttcggacgcgcgtcgctcctgtgcaccttgctctgggcactgctg
gtttgctgtgcagctgtgaccgtgatggttcctcctaaggtggaggtgttgaaaggagaa
actgtcaaactgccctgcacgttcactgacgcaccgccatcaggcaacactatcgtcgaa
tggtacatggaggagcagggagccaggaagcgcgtggctttccgcccccagggtggcgac
gcaaaaatcgacgagggcacccaacttacaggccgtgtcagcatgggagaggacttcagc
ttgaccatcacctcctctcagccctccgacgagctcctcttctactgccaggtcctcgct
ggcactgccggggtcgcagatgcctccactatgctgaaagtcttctgggctcccgagaag
ccagtgctcacgagaccgtcgagtcaggccatttccgtgggagagaccaccagctctgag
attagcgcatgtgtgacgatgaatggacatccccagccaagaatcatctggttcaaagat
gcccagcccctgcctgaatacaaggacaggaaagagaagaccttcatggtcccctcgatg
gtgaaggaagcctcgggtctcttcaccatgaagagcaccttgtacatgcagcccaccaag
gccgacaaggacgccgtgttccagtgcaccgtggagttcagcatgccaggggaccagatc
aaacagaagacgtccgacaccatcaccatcaacctcaactatccatcggagatagcgacc
ttttccctcgtcaacaccgatgcagtcaaagagggcgacactgtcaccatgaagtgtgag
actgacggaaaccctcagcccgagttcgacttcactaaaaacggacaagtcattatcggt
cagggcggactcctgacgctgaaatccgtcaagcgcacagacaccggtttgtacaagtgc
tcagccacggatttcgacaacatagatgctgacctgagcggaacaatcaacctcaatgtc
cactacattgaccccgtgaacgtgacccctgtcaagcctcaagtcgtcatggtcggagac
aaggtggaatggcagtgcaagaccaaagcctccgctgtgcacactgttcagtggaaaaag
ggctctgatgtgctctctcaggacggcactctgtcaatacaagctgtttcctatgataaa
gctggagagtacatgtgtgttggagctgtgccctctgtgccaggactgaccgcggagtat
agtgtcaacctcaccgtcaaaggaaagccgatgatcgaggctcccgctgcaggagaggtg
gtgaaggaaggagacatggtgtctctgaagtgctcggcctacggctaccccgcccctcag
ttcacctggaagccctcaggaaaggagtctgtgtcagtggaaggtaacaaggtggtgagc
accatgaccctgcaaaccacagccgagatcctgaaggccggggtgacctgcgaggtcacc
aacgagcacggagctgatagcaagtccttcccagtatctcttaaacgagcaattgacaac
tcagccgacagagtgctgctctctggaaaccctgtgcttacgtcagctgacaagcagcag
ggaggctccagcggggtggtgatagccgtggtggtgtgtgttctgctgctcctgctgctg
gtggccctcatctacttcctgaataagaagcgcaagttgccctgcagcaagaaggacaag
aaggaagtggccagcggagaagtgaacaacgacatcgtagtggagatgaagacggacaag
gccaatgaagaggccggtctcctcaacaagagaccgtccacagaacagtgttga
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