Hippoglossus stenolepis (Pacific halibut): 118113542
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Entry
118113542 CDS
T08308
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118113542
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118113542
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118113542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ank_2
Ariadne
Ank
IBR_2
Ank_5
Ank_4
Ank_3
UBA_ARI1
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
118113542
NCBI-ProteinID:
XP_035019233
LinkDB
All DBs
Position
8:complement(9433087..9471728)
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AA seq
1116 aa
AA seq
DB search
MGNTATKFRKALINGDEVLACQLYESNPQFKEALDPNSTYGESYQHNTPLHYAARHAMTR
LLRSFLLSKDGNPNKRNVHNETSLHLLCMGPQILISEGALQPRISRPYEDEQRRAECLQI
ILAWTGAKLDHGEYERADVNATDNKKNTCLHYAAASGMKTCVEFLVQREADLFAENENRE
TPCDCAEKQHHKELALCLESQMVFSIAPEAEGIEAEYAALDRRELYEGLRPQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREQLLEAWMNNAEECCQRSGVQMPNPLPSGCNAW
DTLPSPRTPRTTRSSISSPDQISLMPADEESSLCGICMSSISVFEEPVDMSCGHEFCRAC
WEGFLNLKIQEGEAHNIFCPAFDCYQLVPVEVIESVVSREMDRRYLQFDIKAFVENNPAI
RWCPMAGCERAVRLNTQGPGASTSDPLIFPLLRAPAVDCGKGHLFCWECQGVAHEPCDCD
IWKLWQQEVSEMRPQELAGVSEAYEDAANCLWLMSNSKPCAICKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTEEAEKKHKSFQELDRFM
HYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALSGREGGPPDTTFIEDAVLELLKTRRI
LKCSYPYGFFLEPKSTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVEQ
KRLEFLASVARGVAPNDSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGD
MSSLRSSTPDPDDPSDSALDDVGGGRRQGPLMGLGSFDDDDPNILLAIQLSLQDSGLAGS
GSSHEILANEASLGAIGTSLPSRLEQRAPGVEILPRASLSSSELLELGDNLARLSNINIG
SHYSAATSVNASVQHHDSRHRAYRASLPIPVAQGGSSSSTGLFSSSSDTIDSNTCGSHDP
SSSSALAANANLLGNIMAWFHDMNPQGITLVSSTSSDTDSNLGALHAGGRGCPQDDEKPG
VVVLPQEVMADVGFCSRRLSDMEEKDCAVAERPTQLDLVGLETMQLPYMGALEPSGDPAE
RRGSKVCRVDTPQCDSISDQLPSTSSSEWEEQVHLV
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagcgaccaagttccgtaaagctctcatcaatggggatgaggtgctcgcc
tgccaactctatgagagtaacccgcagttcaaggaggctctggatcccaactctacctac
ggagaatcctaccagcacaacactccactgcactatgctgcccggcacgcaatgacacgc
ctactcaggtcttttctcttaagcaaagatggaaatcctaacaagcgtaatgtgcacaat
gagacgtctctgcaccttctctgcatggggccccagatcctgatctcagagggggcactg
cagcctcggatctcgcggccatacgaagatgaacagcgtcgggctgaatgcctacaaatc
atcctggcatggactggggcaaagctggatcacggagagtacgagagggctgatgtcaat
gctacagacaacaagaaaaacacctgcctgcactatgctgctgcctcagggatgaagaca
tgtgtggagttcctggtgcagagagaggcggacctgtttgcggagaatgaaaaccgcgag
actccgtgtgactgtgcagagaagcagcaccacaaggagttggccctatgcctggagtcg
cagatggtcttttcgattgcccctgaggcagagggtatagaggcagagtacgcagccctt
gaccgaagagagctatatgagggcctgcggcctcaggatctacggaggctgaaggacatg
ctgatagtggagacagctgacatgctgcaggcccccctcttcactgcagaggcactgcta
cgtgcccatgattgggacagagagcagctcttagaggcctggatgaacaatgcggaagaa
tgctgccaacgctcaggggtacagatgcccaacccacttccaagtggctgcaatgcctgg
gacaccttgccctcgcccaggacgccacgcacaacccgctcttccatttcctccccagac
caaatcagcctcatgcctgctgacgaggagtcttccctgtgtggaatctgcatgtcttcc
atctccgtctttgaagaacctgttgacatgtcctgtggccacgagttctgcagagcatgc
tgggaaggatttctaaatctaaagatccaagagggtgaagcccataacatcttctgcccg
gcctttgactgctaccagctagtacctgtggaagtcatagagagtgtggtgtccagagag
atggacaggcgatacctgcagtttgacatcaaggcatttgtggagaacaatccagcaatc
cgctggtgtcctatggcagggtgtgaaagggctgtgcgactcaacacccagggtcctgga
gcttccacctcagaccctcttattttcccccttcttcgtgcccctgcagtagactgtggc
aaaggccacctcttttgctgggagtgtcaaggtgtagcgcatgagccctgcgactgtgat
atctggaaattgtggcaacaggaagtctctgagatgaggcctcaagaattggcgggtgtg
agcgaagcctacgaggatgcagccaactgcttatggttgatgagtaactccaagccctgc
gccatttgcaagtcccccatacaaaaaaacgagggctgcaaccacatgcagtgtgctaag
tgtaagtatgacttctgctggatctgtctggaagagtggaaaaagcacagctcgtcaaca
ggaggctactatcgctgcacccgctatgaggtcatccagcaggtggaagagcagtcaaag
gagatgactgaagaggcagagaagaaacacaagagctttcaggaactcgaccgttttatg
cactactacacgcgtttcaagaaccatgagcacagctatcagctggagcagcgcttgtta
aaaacagccaaagagaagatggagcagctcagtcgagccctaagtggaagggaaggagga
ccacctgacacaaccttcattgaagatgcggtcctagaacttctgaagactcgccgcatc
ctcaagtgctcttatccttacggcttctttctggagcccaaaagcacaaagaaagagatc
tacgagcttatgcagactgatttagagatggttactgaggacctggctcaaaaagtcaat
cggccttacctgaggacgccgcgtcacaagatcatccgtgcggcgtgtctggtagagcag
aagaggctggagttcctggcctcagtagccaggggtgtggcccccaatgactctcctgag
gcccccaggcgcagtttcgctggcggaacgtgggactgggaatatttaggctttgcatca
cctgaggagtatgcagagttccagtacagacggagacaccgacagcggaggcgaggggac
atgtccagtctgcgtagcagcacacccgaccccgacgaccccagcgacagcgctttagat
gatgtcggaggtggacgaagacaaggtcctctgatgggtctcggttcattcgatgacgac
gaccctaacattttactggccattcagctgtctctccaggactctggcctggctgggagt
gggtccagccacgagatccttgccaacgaagcctctcttggcgctattggcacctccctg
ccttctaggcttgagcagagggctcctggtgtagagatcctccctagagcttccctaagc
agctcagaactgctggagctgggagataacttggcaagactcagcaacatcaacatcggc
agccattattctgctgctaccagtgttaacgcctccgtgcagcatcatgacagtcgccac
cgggcatacagggcctctctacccataccagtggcccaaggtggcagcagctcgtcgaca
ggcctcttctcctcttctagtgacacaatagattcaaatacatgcggcagccacgaccca
tcctcgtcctctgcgttagctgcaaatgctaacctgctgggcaacatcatggcgtggttc
cacgacatgaatcctcaaggcatcaccctggtttcatcaacctcctccgacacagattca
aacctgggcgcactacatgcaggcggaaggggctgcccgcaagatgacgagaaacccggc
gtggtcgtcctgcctcaggaagtgatggcagacgtgggtttctgctctcggagactgagt
gacatggaggaaaaggactgtgccgtggcggagaggccgacccagttggatcttgtgggg
ctggaaactatgcagctaccgtacatgggtgcgcttgaaccaagtggagaccccgcagag
cgcagaggctcgaaggtctgccgcgtcgacactccgcaatgtgactctatatccgaccag
ctgcccagcaccagctcctctgagtgggaggagcaagtgcacctagtatga
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