Hippoglossus stenolepis (Pacific halibut): 118113564
Help
Entry
118113564 CDS
T08308
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118113564 (col28a1b)
Peptidases and inhibitors [BR:
hsp01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
118113564 (col28a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
118113564
NCBI-ProteinID:
XP_035019281
LinkDB
All DBs
Position
8:complement(24077777..24092539)
Genome browser
AA seq
1196 aa
AA seq
DB search
MLLRANLRRGAGLCLLLLTLVHEATSQRQKSGRRSNYRLHNDEGGHGPCSLEVVFIVDSS
ESAKTVLFQRQKKFVLSFSTRLSTLQVAGWKLQVRMAALQYSSSVSVEQRFSAWKDLDSF
HGQVSAMSYIGHGTYTTYAITNASQLLVQETPADSVRVAVLMTDGVDHPRNPDVIAAAAE
AKGHGIRFFAVGLSNIAQQSPNSAKLRAVASAPAQQFVQSLLDAQLEETLLREMAAVASE
GCPQAQVCLCERGERGPPGSAGRKGDPGLRGSSGVQGARGESGLNGRPGSDGIEGLPGHK
GNKGERGDCGTPGTKGDAGPEGLAGPRGSHGEQGSLGPAGDSGPEGPAGPKGDRGFVGAA
GAPGERGIGFPGAKGEKGNDGRPGPTGLVGIGEPGLPGPQGPSGALGNPGPPGEGFTGPK
GDRGYQGPRGIRGLPGAGVKGDMGSRGPPGISGPLGAPGSGPQGDKGDQGPVGPSGLRGA
PGIGITGPKGIQGVTGEPGLPGERGVGQPGPKGDPGAEGVAGIPGQPGEDGTLGKKGDLG
LPGLRGPDGAPGKGAPGGKGDRGDRGSRGLSGAVGPVGPMGPKGEPGIIGRVGSTGAPGR
GIPGAKGEPGPQGPAGALGGPGIGLTGPKGDRGTPGPAGSPGPKSEGVPGPPGLLGSPGL
MGEAGPEGVGLPGPKGDRGLPGPSGPAGLPGIGLIGPKGSVGQMGQTGPQGLTGEGIQGQ
KGEPGFQGVPGPRGPTGLGVQGSKGDRGLRGEKGRGGDRGKAGEPGTIGSLGRAGQKGEA
GLTREEVVRIVRSICSCGVTCRQTPLELVFVIDSSESVGPDNFNVIKDFVNALIDRASVS
RDTTRVGVVLYSHINMVVVSLEQVASPDQVKSAVRSMTYIGEGTFTGSAIQQANQVFRGA
RAGVRKVAIVITDGQADKRDSVQLERAVAEAQASNIETFVVGVVNQSDPLYEEFKKELNL
MASDPDSDHVYLIDEFKTLPALEKKLLSRICEDGERHLFSSIPSSGNPPGVPETSGNVRE
PPYRTDTDTPTFTGDSRRVQMVPGAPGSPLDREEVSPQRPKPDTRAPTDTQRFPFFDWEP
FRPVTELLPRFEGKKPSTHTETNGAAGPAGPTVKAPPEERTPPPSPQPPPLVTSDTGVSA
ERCIQVLDPGPCRDYVVRWYYDANGNSCAQFWFGGCQGNSNQFENERSCKETCVKV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgagggcaaacctgaggagaggagcggggctttgcctcctgctgctgacgctc
gtacacgaggccacgagccagagacaaaagtcaggacgcaggagcaactacaggctgcac
aatgacgagggaggacatggtccctgctccctggaggtggtcttcatcgtggacagctct
gagagtgcgaagaccgtcctgttccagaggcagaagaagttcgtcctgagcttcagcacg
cggctctccacgctgcaggtggccggatggaagctgcaggtgcggatggccgcgctccag
tacagcagctccgtgtccgtcgagcagcgcttctccgcctggaaagacctggactcgttc
cacggtcaggtcagcgccatgagctacatcggccacggcacctacaccacctacgccatc
accaacgcctcgcagctgctggtgcaggagacgccggcggacagcgtgagggtcgcggtg
ctgatgacggacggggtcgaccatccccgcaaccctgacgtgatcgcagctgcggccgag
gccaaaggtcacggcatcaggttcttcgccgtgggcttgtcgaacatcgcccagcagagt
ccgaacagcgccaagctccgggccgtggccagcgcaccggcccagcagttcgtccagagc
ctcctggacgctcagctggaggagacgctgctcagggagatggctgcagtcgcatcagaa
ggatgtccacaagcccaggtgtgtttgtgtgagagaggagagaggggccctcctggaagt
gcgggtagaaaaggagaccccggcctcaggggttcatccggcgtccaaggagcgaggggg
gagtccggactgaacggtcgaccaggaagtgacggcatagagggtctcccagggcacaag
ggcaataagggcgagagaggagactgtggcactccagggacaaagggtgacgctggaccc
gagggacttgcaggcccacgaggctcacatggagaacagggttcgctgggaccagcagga
gactcaggtcctgagggaccagcgggacctaaaggagacagaggattcgtgggagctgct
ggggcaccgggggaaagagggatcggattcccaggagccaagggtgaaaaaggaaacgat
ggaagaccaggtcctacaggtcttgtcgggatcggagaaccaggactaccaggtcctcaa
ggaccatctggagcactaggaaaccctggaccacctggagaggggttcacaggaccaaag
ggggatcgaggatatcagggtcccagaggcatccgtgggcttcctggagctggggtcaaa
ggtgacatgggcagccgcggacctcctgggatttcgggtccactcggggctcctggttca
ggacctcaaggagataagggggatcaaggcccagttggaccctcaggactcagaggagct
ccaggtatcggaataacaggacctaaggggattcagggagtgacgggtgaacctggtctg
ccgggcgagagaggagtgggacaaccaggaccgaagggcgacccgggggctgagggggtg
gcaggtataccaggtcaaccaggagaggatggaaccctgggaaaaaagggtgacctcggg
ctaccgggcctcaggggacctgacggggctccgggtaaaggggctcctggaggcaaggga
gacagaggggaccgggggagcagaggcctgtcaggtgcagttgggcccgtggggccgatg
gggccaaagggggaaccaggaataattgggcgagtgggttcgactggagctccagggcga
gggatacctggagccaagggagaaccgggtccacagggtccagccggagctttgggagga
ccagggatcggtttaactggacctaagggcgacagaggaacaccaggacctgctggttcc
cctggaccaaagagtgaaggcgtccctggtcctccaggacttctggggtctcctgggttg
atgggagaggccggaccagagggagttggtttaccaggaccaaagggggacagaggactg
ccgggaccctctggacctgcagggcttccaggaatcggtctgattggtcctaagggttca
gtcggtcaaatgggacaaacaggtccacaggggttaactggagagggcattcaaggacaa
aagggggagcctggatttcagggggtccccggccccagaggccctactggactaggtgtg
caggggagcaagggggaccgaggcctccgaggtgagaagggcagagggggggacagagga
aaagccggagaaccaggaaccatcggatctttgggccgagccggacagaagggagaagct
ggacttacaagggaagaagtcgtcagaatagtgagatccatctgcagttgtggagtgacc
tgccgtcaaacccccttggagctggtctttgtgattgacagctcagagagcgtcggccct
gacaacttcaacgtgattaaagacttcgtgaacgccctgatcgaccgggcctcggtcagc
cgagacaccacgcgggtcggcgtggtcctctacagccacatcaacatggtggtggtcagc
ctggagcaggtggccagccccgaccaggtcaagtccgcggtgcgctcaatgacctacata
ggcgagggcaccttcaccggcagcgccatccagcaggccaaccaggtgttcaggggggcg
cgggcaggcgtgaggaaggtggccatcgtcatcacagacggtcaggccgataagagggac
tcggtccagctggagagggccgtggcagaagctcaggcgagtaacatcgagacgtttgtg
gtcggggtggtgaaccagagcgaccctctctacgaggagttcaagaaggagctcaacctc
atggcctccgaccccgacagcgaccacgtgtacctgatcgacgaattcaaaactctgcca
gctcttgagaagaaactgctgagtcgtatctgtgaagacggagagagacatttgttcagc
tccatcccgagctccggaaatcctccgggagtccctgagacgtccggtaacgtccgggag
cccccgtacaggacggacacggacacgcccaccttcacaggagactccaggagggttcag
atggtgcccggcgctccaggctctccgctcgacagagaagaagtctctccgcagagaccc
aagccggacaccagagcccccacagacacccagaggtttccgttcttcgactgggagcct
ttcagaccagtgacagagctcctccctcggtttgaggggaagaaaccctcaacccacacg
gagacgaacggagccgccgggccagccggtcccactgtgaaggccccgcccgaggagagg
acgccaccgccgtcaccacagcctcccccgctggtgacctccgacacaggcgtatctgcg
gagcggtgcatccaggtcctggacccgggcccgtgtcgagactacgtggtcaggtggtac
tacgacgccaacggcaattcctgcgcccagttctggttcggaggttgtcagggaaacagc
aaccagtttgagaacgagaggagctgcaaagaaacctgcgtcaaggtctaa
DBGET
integrated database retrieval system
