Hippoglossus stenolepis (Pacific halibut): 118113644
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Entry
118113644 CDS
T08308
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118113644 (cdh17)
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Major cadherins
118113644 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RibLong
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
118113644
NCBI-ProteinID:
XP_035019448
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Position
8:15235332..15244854
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AA seq
868 aa
AA seq
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MTPMVHLLLLPLLFSIAGGKDLEEKKGLFENTVLDVPEGTPVPYPMYQFQVTTPGVNNFR
LSGEGQEDIKISKDGWLFLERPLDWSQDNHYIIKVEALADDEVVEGPVYVTINVLDINNK
APTFVQSDYTAVVREHSAAGVAFTRVSASDEDDPETPNAHLRYSLVSQMPSKNQILLFQI
DPNTGEISTTEEGEKGLNARESIQYTRGEDQSIEALKTKFDDYCPVPKIPYEQNPFFTCV
ERAEMRRRTMDPMDDPDYILFVRVQDLGGESESALTGNTRVRIIVQQNLWVNPGPITVKE
HLEGIYPLTIGKVQSNEPEAVYSLVQKERELKFPFQIAENGEILLTEPLDREDKDMYILV
VFAKDADNKEVDRPLEIQVLVEDVNDNAPVCENEETVFEVQENEPVGSLIGQLMARDDDQ
PETMNSHLTYTLLPEDPSTPNKVFSIDAASGRIQALSMLQRREHQVYQLDVRVSDPGFSV
DCKVVIKVIDVNNEKPEFEKNDYGSHTLAEDTPVGHTVVTITATDADDPGSGSALIEFHI
SAGNDDDVFAVETDGKGVGQLVIVKPLDFEASPTYKLQIDARNPEPLMTGLEYGIESTAF
VTVSVTDVDEAPEFSLDFLDVAVPENTTKGSVLLNVEAKDPEGKEIIFKLEGDARGWLEI
DAATGQIRTKDKLDKETLEAFEVTVTAFEKGNPKMSSERVVYVRLLDVNDNIPKLIETEA
FICVANPKPVIIKARDEDSAPFSQPFTFAFAKKSPNWDLSRVDDTSAKLTLRKKTTEDRT
FSLAINIKDNAGMGISQRFDVRVCNCTTQGYCYIAPEDRSFRLGMGPTIGILVGTMGFCI
LAFIIVIKRINKKGKKPKETTEDGNALM
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttgctcccactcctgttcagcattgctggtgggaag
gacctggaggagaagaagggcctgtttgagaacacggtgctggatgtgccagaggggacg
ccggtgccgtatcccatgtatcagttccaggtgacaactccaggtgtgaataatttccgg
ctgagtggagaaggtcaggaagacatcaagatttcaaaggacggctggctcttcctggag
agaccactagactggtctcaagataaccattacattatcaaggtggaggcgctggcagat
gatgaagtggtggaaggtccagtttacgtgaccataaatgtgttggacatcaacaacaag
gctccaaccttcgtccagagtgactacacggctgtggttagagaacacagtgcagcaggt
gtcgcattcactcgtgtgtctgcatcggacgaggacgaccccgagactcctaatgctcat
ctgcgctacagcctggtcagccagatgcccagcaaaaaccagatcctcctgttccagatc
gaccccaacaccggagagatctccaccacagaagaaggggaaaaggggctaaatgcccga
gagagcatccagtacacccggggagaagatcagagcattgaggctctgaagacaaagttt
gacgactactgtccagtgccgaagatcccctatgaacagaaccccttcttcacctgtgtg
gagagagcagaaatgaggaggaggactatggaccccatggacgacccagactacatcctc
tttgtgcgtgtgcaggatctgggaggagagtcggagagcgcgctgactggaaacaccaga
gttcgcattattgtgcagcaaaacctgtgggtcaaccctggaccgataactgtgaaagag
cacttagaaggaatttatcctctgaccattggaaaggtccagtccaacgagccagaggcc
gtctacagtttggtgcagaaagagcgagagctgaaattccccttccagatcgcagaaaat
ggagaaatcctcctgacagagccgctggacagagaagacaaggacatgtacatcctggtg
gtgtttgcgaaggacgccgataacaaagaggtggatcggcccttggagattcaggtcttg
gtggaggacgtgaatgacaatgcaccagtgtgtgaaaatgaggagactgtgtttgaggtg
caggagaacgagcctgtgggcagcctgataggacagctgatggcccgtgatgacgatcaa
cccgagacgatgaattctcacctgacttacaccctcctgcccgaagatccatccacccca
aacaaagtcttctccatcgacgctgcctctggaagaattcaggcgttaagcatgctacag
cgaagagaacatcaggtctatcaactggatgtgagagtcagcgacccaggtttcagtgtg
gactgcaaagtggtcatcaaggtcatcgatgtcaacaacgagaagcctgagtttgagaag
aatgattatggcagccacactctggcagaggacacccctgtgggacacactgtggtgacc
atcacggccacggacgctgacgacccaggcagcggcagcgccctcatcgagttccacatc
tccgccggcaacgatgatgacgtgtttgccgtggaaactgacggcaagggcgtcggtcag
ctggtcatagtcaagcctttggactttgaggcgtctcccacctacaagctccagatcgac
gctcgtaacccagagccgctgatgacaggcctggagtacggcatcgaatccacggccttc
gtcaccgtgtctgtcaccgacgtggacgaggccccggagttcagcctggacttcctggac
gtggccgtacccgagaacaccaccaagggatcggtgctgctcaatgtggaggcaaaggac
ccagagggcaaagagatcatcttcaagttggagggtgatgctcgtggctggctggagatc
gatgctgccacaggacagatcaggaccaaagacaagctggacaaggagaccctggaggcc
ttcgaagtcaccgtcactgcatttgagaaggggaaccccaagatgtcttctgagcgcgtc
gtgtacgtgcggctgctggacgtgaacgacaacatccccaaactgatagagaccgaggcc
ttcatatgcgtagccaatcccaaacctgtcatcatcaaggcccgagatgaagacagcgct
cccttctcccagcccttcaccttcgccttcgccaagaagtcacccaactgggacctgagc
cgtgttgacgatacctcagctaaactgaccctaaggaaaaaaacgactgaagatagaacc
ttttcacttgccatcaacattaaagacaacgcagggatgggaatctcccagcggtttgat
gtgagagtgtgtaactgcaccacgcagggctactgctacatagcaccagaagatcgttcc
ttcagattggggatgggacccaccatcgggatcctggtcggcacgatgggattctgcatt
cttgccttcatcatagtgatcaaacgcataaataaaaagggcaagaagccgaaagaaacg
actgaggatgggaacgccctgatgtag
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