Hippoglossus stenolepis (Pacific halibut): 118113883
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Entry
118113883 CDS
T08308
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118113883 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118113883 (bbs4)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
118113883 (bbs4)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
BBSome
118113883 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_19
TPR_14
TPR_11
ANAPC3
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_6
TPR_9
TPR_7
ARM_TT21_2nd
ARM_TT21_4th
TPR_15
NatA_aux_su
ARM_TT21_N
ARM_TT21_C
PknG_TPR
Coatomer_E
ChAPs
TPR_20
DUF6614
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
118113883
NCBI-ProteinID:
XP_035019836
LinkDB
All DBs
Position
1:complement(6302881..6315838)
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AA seq
541 aa
AA seq
DB search
MATASSVAHPKMADQEAAAALPVSTEAKKRRAPKAPDLPIVERRNWLIHQHYIHKDFDTC
KMIVKEQLQETNGTCEYAIYVQALILRLEGKIQQSLELFQSCAILNPSSADNLKQVARSL
FLLGKHKAAIEFYHEAARLNEKDWEISHNLGVCCFFIKDFKNAEEHLNMALQINKHDKTF
MMLGQVHLLAGESDKAIEVYKRAVEHFPENTELLTTLGLLFLQLGKYQRAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAMPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELFMLLAVALTNL
EDVDNATRAYEQAVTLDESSPLVNLNFAIFLYNHVDKKGALDQYQEMERKVNLLRDTSSN
FEFDLELMDMAQKMGAALQVTESLVWTKPGKDSKSKPNSAAATRTPGTALGTNQALGQAM
SSAASYNKNLQLQAGPSMPLEPEPDVDRAPSPPTDPPGSPLPAESDNPRPKSSKRKTKVE
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcttctagtgtcgctcatcccaagatggcggaccaggaggcagccgcggcg
ctcccagtttctactgaagccaagaaacgacgggcacccaaagctccagaccttcccatt
gtggagaggaggaactggctcatccaccagcactacatccacaaagactttgacacatgc
aagatgatcgtcaaagaacaactgcaggagacaaatggaacgtgtgaatatgccatatat
gttcaagcactaatcttacgtcttgagggcaagatccaacagtccctggagctgtttcag
agctgtgccatccttaatcccagcagtgctgacaatctgaagcaagtggccagatcctta
tttctcctgggaaagcacaaagcagccattgaattctatcatgaagctgcaaggctcaac
gagaaagactgggagatcagtcataatctgggcgtgtgctgtttcttcatcaaagacttc
aaaaatgctgaggagcatctgaacatggctcttcagataaataaacacgacaagactttc
atgatgcttgggcaggtccacctgctggctggagaaagtgacaaggccatcgaagtgtat
aagagagcagtggagcacttcccagagaacactgaactcctgactactctcggcctgctg
tttttacagcttgggaaataccaaagagcttttgagcaccttggaaatgccctcacattt
gaccccaacaattataaggccatcctggctgcaggcagcatgatgcagacccacggggac
tttgatgtggccatgaacaagtaccgggtggcagcctgtgccatgcccgagagcccccct
ctctggaacaacatcggcatgtgcttctttgggaaaaagaaatatgttgctgccatcagc
tgcctgaagcgagcccactacttgtctccttttgactggaaggtgttgtacaacctgggt
ctggtgcacctgaccatgcagcagtacgcctcggccttccacttcctcagcgcagccatc
aacctgaacccacggatgggagaactcttcatgttgctggcagtggctctgactaacctg
gaggatgtggacaatgccaccagagcgtatgaacaagctgtgactctggatgaatccagc
cccctggtgaacctgaactttgcgatctttctctacaatcacgttgacaagaaaggagcc
ctggatcagtaccaggagatggagaggaaagtcaacctgcttcgagacaccagtagcaac
tttgaatttgatctggagctgatggacatggctcagaagatgggagctgccctgcaggtg
acagagagtctggtgtggaccaaaccaggaaaagactccaaatcaaaaccaaactcggca
gcagccaccagaacccccggcactgccctcggtactaaccaggccctgggtcaggccatg
tcatctgctgcgagctacaacaagaacctccagctgcaagcgggcccctccatgcccctc
gaaccagaacccgacgtggacagagccccgagcccccccactgatccgccggggtctcca
ctgcctgcggagtccgacaaccccagacccaaaagctccaaaaggaaaactaaggtggag
gaatga
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