Hippoglossus stenolepis (Pacific halibut): 118113997
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Entry
118113997 CDS
T08308
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118113997 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118113997 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118113997 (taf2)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118113997 (taf2)
Peptidases and inhibitors [BR:
hsp01002
]
Metallo peptidases
Family M1
118113997 (taf2)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118113997 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
118113997 (taf2)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118113997 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
IL2
Peptidase_M1_N
SR-25
CCDC106
Motif
Other DBs
NCBI-GeneID:
118113997
NCBI-ProteinID:
XP_035020068
LinkDB
All DBs
Position
8:complement(7744627..7765421)
Genome browser
AA seq
1235 aa
AA seq
DB search
MNRKKDKGFESPRPFKLTHQMVCINNINFQRKSVIGYVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGELVIKVP
SELWKQGDDLKVLKVYIEFSLDQPKGGLHFVVPDVEGTMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETMYTNDMRKKTYHYVLPIPTASPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
PYVQVSSYASMSIFSTNLLHSAMIIDQTPQTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDRIVDYELKMGGVLLHPTFSGGKEKDNPTPHL
HFSIKHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTHAFLKSISNVSGKDIGPLIKQWVDQSAVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFKHTLQIEENSLKHDIPCHSKSRRVKFLLVLCDSLPR
NKKKKIPLVNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERD
VVAQEESILALEKFPTPASRLALTDILEQEQCFYKVRMQACFCLARIANSMVSTWQGPPA
MKSLFTRMFCCKSCTNIVKTNSFISFQSYFLQKTMPVAMALLRDVQNLCPKDVLNFILDL
IKYNDNRKNKFSDNYYRAQLIEALTNSLTPAISINNEVRTVDNLNADVRLILEEITRFLN
MEKLLPSFRNTITVSCLRAIRELQKNGHIPSDPSLFKSYAEFGHFVDVRVAALEALVDYT
RVERSAADLQWLLAMVQNDPTHYVRHKVLSMLGKNPPFTKTSDSPLCNEALVDQLWKLMN
SGTSHDWRLRCDAVNLYYALFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELGVSGG
METPASIGIHGVGMCYTAVDEEPDPISLGVCGVGQPPLGLKRKAETPLGSPPEPGQVLQQ
QEDEGRAGRYKIRVKDLSFPPKFNTMEEEDIDMETVHDSQAFIHQHLNLMERPSTPGKEP
LSVEQSMLSMPATPVPSFTKETTSTSSKHGSEHSHHHHHHHHHHEHKKKKKKHKHKHKHK
HKHESKEKERERDNSHVYSNSPASGRSLRSPSLSD
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaggataaagggtttgagagcccgcgaccattcaaattgacccatcag
atggtgtgtatcaacaacatcaacttccagaggaaatctgtcatcggctatgtcgagctg
accatcttccccactgtggtcaacctgaacaggatcaagctcaacagtaaacagtgccgc
atttacagggtccgagtcaatgaacttgaagccccgttcatttacaatgaccccacactg
gaggtgtgccaccatgagtccaagcagaggaacctcaactatttctctagtgcttacaca
gcagcagtgagtgctgtggacccggatgcaggacacggggagctggtcatcaaggtgccc
tctgaactctggaaacaaggagatgatttgaaagttttaaaggtgtacatagaattctca
ctggaccagccaaaaggaggtctccacttcgttgttcctgatgtggagggcaccatggca
gagagaggagctcatgtgttttcctttggataccagaactccaccagattctggttcccc
tgcgtggactcctactcagagctgtgtacgtggaagctggagttcactgttgatgcttcc
atggtggcagtgtcctgtggtgatctggtggagaccatgtacaccaatgacatgaggaag
aagacttatcactatgtcctccccattcccacggcatcccctaacatctccctggctgtg
gggccctttgaaatccttgtggacccctacatgcacgaggtgacccacttctgtctgccg
cagctgttgccactgctcaaacactccatgtcatacctgcatgagatttttgagttctat
gaagagatcctgacgtgccgttacccttattcctgcttcaagactgtgtttgtggatgaa
ccctatgtgcaagtgtcctcttatgcatccatgagcatctttagtaccaacctgcttcac
agtgctatgatcatagaccagaccccacagactcgtcgttgtctggcccaggccttggct
cagcagttctttggttgtttcatctccaggatgtcatgggctgatgagtgggtgttgaag
ggaatctcaggctacatctacggcctctacctgaagaaaacctttggagtcaatgagtat
cgacactggataaaagaggagctggacaggattgtggactatgaactaaagatgggaggg
gtcctgttgcacccaaccttcagtggaggcaaagagaaagacaatccaactccacacctt
cacttctccatcaagcacccccacacgttgtcctgggaatactacaagatgttccagtgt
aaagcccacctggtgatgaggttgatagagaacaggatcagcatggagttcatgttgcag
gttttcaacaagctcctgagtttggccagtacggcctcatcccagaagtatcagagtcac
atgtggagccagatgcttctgtctactcacgctttcctcaaatccatctccaatgtctct
ggcaaagacataggcccgctgatcaaacaatgggtagaccagagtgctgtggtgaaattc
tttggaagttttgcctttaacaggaagaggaacgtgttagagctggagatccgtcaggac
tacacatcatctggaactcagaaatatgtgggtcccatcaaggtgacagtgcaggagctg
gatgggtccttcaaacacacactgcagatagaggaaaacagcctcaaacatgacatcccc
tgccactccaagagcagacgtgttaagtttttgttagttttgtgtgattctcttcccaga
aacaagaaaaagaagatccctctggtgaatggagaggaggtggacatggatttgtcagct
atggacgctgactctcctctcctctggatccggattgaccccgacatgtccattctgcgg
aaggtggagtttgagcaggctgacttcatgtggcagtatcagctgcgctatgagagggat
gtagttgcacaggaggagtctatcttggcgctggagaagttcccaactcctgcctccaga
ctggctttgactgacatcttagagcaagaacagtgtttctacaaagtccgcatgcaggcc
tgcttctgtttggccaggatagccaattctatggtgagcacatggcagggcccacccgct
atgaagtccctgttcaccagaatgttctgctgtaagagttgcaccaacattgtcaagacc
aacagcttcatcagcttccagagctacttcctacaaaagacgatgcctgttgccatggca
ctactcagagatgttcagaacctctgtcccaaagatgtcctcaactttatacttgacctc
atcaagtataacgacaacagaaaaaacaaattctcggacaactactatcgggcacaattg
attgaagcactgaccaactctctgaccccagccatcagcatcaacaatgaggtgcggaca
gtggacaatttaaatgctgacgtccgtctcatcttggaggagatcacccgattccttaat
atggaaaaactgctccccagcttcaggaacaccatcactgtcagttgtctgagagcaatt
cgggagcttcagaagaacggccatattcccagcgacccatcactgttcaagtcctacgct
gagtttggacattttgtagatgttcgcgtcgctgccttggaggctctggtggactataca
agagtggaaagaagtgcagcagacctgcagtggctgctcgccatggtccagaacgaccca
actcattatgtcagacataaggtcctgagcatgctcggtaagaatccacctttcacaaag
acatcagactcccctctgtgcaatgaagcactggttgaccaactgtggaagctcatgaac
tcaggtacctcgcatgactggcggctacgctgcgacgcagtgaacctctactacgcattg
tttggtctgacccgtccttcgtgtctgccactgccagagttgggcctcgtgctcaacctg
aaggagaagaaagccgtgctcaacccgaccatcaagcctgagctgggggtcagtggtggt
atggagacacctgccagtataggtatccatggagttggcatgtgttacacagctgttgac
gaagagccggatcctatttcattgggggtgtgtggggtgggtcagccacctctcggcctg
aagaggaaggctgagaccccgctgggctcccccccagagccgggacaggtactgcagcag
caggaagacgaaggcagggcagggcgctacaagatcagagtaaaggatctttcctttccc
ccaaaatttaacaccatggaagaagaagatatcgatatggagactgttcatgatagtcag
gccttcatccaccaacatcttaatctgatggaaagaccctctacaccaggtaaagagccg
ctgtcagtcgaacagtccatgctctccatgcccgccacgccagtgccctccttcaccaaa
gagaccacctccacctcgtctaaacacggcagcgagcacagccaccaccatcaccaccac
caccaccaccacgagcacaagaagaagaagaagaagcacaagcacaaacacaagcacaag
cacaaacatgaaagcaaggagaaggaacgagagcgggacaactcacacgtttacagcaac
agcccagccagcggcagatccctgcgctcgccatctctgtccgactaa
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