Hippoglossus stenolepis (Pacific halibut): 118114008
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Entry
118114008 CDS
T08308
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118114008 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118114008 (prpf3)
Spliceosome [BR:
hsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118114008 (prpf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
118114008
NCBI-ProteinID:
XP_035020082
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Position
8:16746663..16753890
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AA seq
711 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSARGSKGSGEKNRKRDLKDVFGDETDPGAKREPQNSGDGTVAKRKR
VPRFEEVEEREVIPVPPSESSGMLTKMQIKQMMEAATKQIKEKKKQLNFSSPTPAPQMFS
LATPQSQMEASTVSRLLSTNAAAAVGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQ
LAMKPGILGALGNTGPHNLVALANLHAMGIAPPKVEVKEVNKPTPLILDEKGRTVDASGK
EVELTHRMPTLKANIRAVKREQFRQQLKEKPGEDMESTSYFDQRVFITPAQRPRRGFKFH
DQGRFEKIAQRIRTKAQLERLQCEIAQAAKKTGIQASTKLALIAPRKEIGEWEVPNIEWW
DSFILPNNVDLSTETKFERLELFGVTNLVEHPAQINPPVDTDKAVTLGVYLTKKEQKKLR
RQTRREGQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEDANAARKLTAGQRKEKKVKKLKEDITNGVHIAVYRIRYLQSTSKKFKVEKNAIQLYL
SGTVVLHRDVNLVVVEGGPKSQKKFKKLMMHRIKWQEHNSKRDDPDGDEEARRNNKCWLI
WEGTAKERSFGDMKFKQCPTENMAREHFKKHRTEQYWDLALSQSVLETSDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccgaagcgagaggtggaggagttgagaccatgggtggagcgcactgtgaag
aaagtgctcggtttctcagagcccactgtggtcactgcagctttacactgtgttggaaag
ggactggacaaaaggaagaccatagaccagctgcgtcctttcctcgatgactctgcgggg
ggtttcgtggagcgtctttttgaagcgctggaggagagtcgcagtgcccgcggcagcaaa
ggatccggagaaaagaaccgcaagagagacctgaaggatgtgtttggggatgaaactgac
ccgggtgccaagcgagaacctcagaactcaggagatgggacagtggcaaagcgaaaacgg
gtccctcgattcgaggaggtggaagagcgtgaggtcatccctgtacctccatctgaaagc
tctggcatgctcaccaaaatgcagattaaacagatgatggaagcagccacaaaacagatc
aaagagaaaaagaaacaactgaatttttcatctccaactcctgctccacagatgttttcc
cttgctacaccacagtcacaaatggaagcctccacagtatcacggcttctcagcaccaat
gctgctgcagctgttggtggtgcctcatccattgccccctcccaggctgccagctttatg
aatgatgctatcgagaaggcccgcaaggctgctgagctacaggcacgcatccagtcccag
ttagccatgaaacctggtatcctcggagcattgggaaacactgggcctcacaacctagtg
gcactagctaatctacacgccatgggaattgctccaccgaaagtggaagtcaaggaggtg
aataagccaacacctcttatcctggatgagaagggaagaactgtggatgcaagtggcaaa
gaggttgaactcacacatcgcatgcccacactaaaagctaacattcgagctgtgaagaga
gagcagttccgtcagcagctgaaggagaagcctggtgaagacatggagtccacgtcctac
ttcgaccaacgtgtatttataacaccagctcaacgccctcgcaggggcttcaaattccat
gaccaggggcgcttcgagaagattgctcagagaattagaactaaggcccagttggaaagg
ttgcagtgtgagattgcccaggcagcaaagaagacaggaatccaggcgtccaccaagctc
gccttgattgcacccaggaaggagattggagaatgggaggtgcccaacattgagtggtgg
gactctttcatcctgcccaacaacgtagacttaagcacagaaacaaaatttgaacggctg
gagttatttggtgtgaccaaccttgtagaacatcctgcacaaattaaccccccagttgac
acagataaggcagtcacgcttggcgtgtacctgacaaagaaagaacagaagaaattgaga
agacagacgcgaagggagggccaaaaagaagttcaagagaaggtccgtctgggtctcatg
cctccaccagaacccaaagtgcgcatctccaacctgatgagagtgctggggacggaggca
gttcaggacccaacaaaagtagaggcccacgtcagagcacagatggccaagagacagaag
gctcatgaagacgccaacgccgctcgcaaactcacagcagggcagaggaaagagaagaag
gtcaagaagttaaaagaagacattactaatggtgttcacattgcagtgtacaggatccgt
tacctgcaaagtacttctaagaagtttaaagtggagaaaaatgccatccagctgtacctg
tcaggcacagtagtcctgcacagagatgtcaaccttgttgtagtggagggaggccccaaa
tcccagaaaaagttcaagaagctgatgatgcacagaatcaaatggcaggaacacaacagt
aaaagagatgatcctgatggtgacgaggaggccaggagaaataacaagtgttggttgatt
tgggagggaacagccaaggagcgcagttttggagacatgaagttcaagcagtgtcccacg
gagaatatggccagagagcacttcaagaagcaccgcacagaacagtattgggacctggcc
ctcagccagagtgtgttggaaacctcggacgactga
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