Hippoglossus stenolepis (Pacific halibut): 118114011
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Entry
118114011 CDS
T08308
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118114011 (tmc4)
03037 Cilium and associated proteins [BR:
hsp03037
]
118114011 (tmc4)
Transporters [BR:
hsp02000
]
Other transporters
Pores ion channels [TC:
1
]
118114011 (tmc4)
Cilium and associated proteins [BR:
hsp03037
]
Other cilia and associated proteins
Stereociliary proteins
118114011 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
118114011
NCBI-ProteinID:
XP_047196907
LinkDB
All DBs
Position
8:complement(17183890..17190273)
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AA seq
696 aa
AA seq
DB search
MASELQDSSGVYEYTEGFSYPGEQQQPLRLRRVSSQDSNQNYPQFNWNTEEDEEGTSGPP
RDLRSIPLPMSLKRAVRQVQQMQVPVVSSAESWKRKKTKSLRKLEDNSKQLLYVFALWNK
TLQKIGGNFGSGVHSYFLFLRFLVVLNFVSFFLIAGFVLAPSIVFRSVGSSLVNSTGPAE
CMEYNPNPKVSVFYQYFLDLLSGTGFMEYSYLFYGYYSNTLVENKNVTYNIPLAYVLTAA
FYFAFCLICIIARMGSNARVAVATGGSTMGSYSMIVFTGWDYSCLRDQDTKLKQKNIHYR
LQVDLEEERLKKRAAALTLCQKVVLYSLRIFLHLVAFGLIIGAFYGISLAANFSQQNIQV
QGILGLVYEYLPSIVITTGNFVVPLLCDQIALIENYSPSTTVIVALLRAVFLRLVSLGVL
LFTLWRQITCDGNIDGVDCTLCQYNYDLYPCWETRIGQEMYKLTLFDLLINIAVLVLVEF
PRRMVVDNWSCKLAQLVGRQEFDVPSNVLGLVYGQTAVWTGTLFCPLLPLINTIKFIIIF
YCKKITLFYNCRPAHKTFRSTTSTFFFLVVLLFGWGLATVVMVYSLAEIRPSLGCGPFRF
FPNMWSVVPTSFYNLTETTQEFLFFIGSQSFSIPLFALSCVLMCYFIALASVYGNSVALL
RAQLKLEGRDKQFLVKQIEQLGRQLHIPTHNAGVQD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaactacaagactcaagtggagtgtatgaatacacagaaggtttcagttac
cctggtgagcagcagcagccgctgaggttacgcagagtttcatctcaagactcaaatcag
aattaccctcagttcaactggaacacagaggaggacgaggagggcaccagtgggccgccc
cgggacctcaggagcatcccactgcccatgagtctgaaaagagctgtgaggcaggtgcag
cagatgcaggttcccgtggtttccagtgctgagtcttggaaacggaagaaaaccaaatct
ctgcgtaaacttgaagacaactccaaacaacttctctatgttttcgcactgtggaacaag
actttgcaaaagattggagggaactttggaagtggtgtccactcatactttcttttcctg
agattcttggtggtgctcaactttgtttccttctttctgatcgctggattcgtcctcgcc
cccagcatcgtcttcagatctgttggctccagcctcgttaatagcaccggtccagctgaa
tgtatggagtataaccctaatcctaaagtctcggtgttctatcaatatttccttgattta
ctgtcgggaacgggttttatggagtattcctacctgttttacggctactacagcaacaca
ctggtggagaacaagaacgtcacctacaacattcccctggcctacgtcctgactgccgcg
ttctacttcgccttctgtctcatttgtatcatagcacgcatggggagtaacgctcgggtt
gccgtggcaacgggaggcagcaccatgggcagctacagcatgatcgtgttcaccggctgg
gactacagttgcctgagagaccaagataccaaactgaagcagaaaaacatccactaccgg
ctgcaggtggatctggaggaggagagattaaagaaacgggcagctgctctgaccttgtgt
caaaaagttgttctatactctctacgtatttttttgcatttggttgcttttgggctcatt
ataggagccttctacggcatctctctggccgccaacttcagccagcaaaatatccaggtg
caagggatcctgggtttggtctatgagtatcttccctccatcgtcatcaccactgggaac
ttcgtggtgcctctgctgtgtgaccagatcgccctaatagagaactactcccccagcacc
actgtcatagtggcactactaagggccgtgttcctgcgtcttgtgagtctgggagttctc
ctcttcaccctgtggcgtcagatcacctgcgatgggaacatagatggtgtagattgtaca
ctgtgccagtacaactatgatttatacccatgctgggaaacacgtatcggacaggagatg
tacaaactgacactatttgacctcctcatcaacatcgccgtgctcgtcctggtggagttt
cctcgcaggatggtggtggacaactggtcctgtaagctggcccagttggtgggtcggcag
gagtttgatgttccctccaacgtgctcggccttgtttatggtcagactgctgtttggact
gggactcttttttgccctctgctgccgctcatcaataccatcaagttcatcatcatcttc
tactgcaagaagatcacgctcttctataactgccgaccagcacacaagacgtttcgctcc
accacctccaccttctttttcctggtggtcctgctgttcggctggggcctggccacagtt
gttatggtttatagtctggctgagattcgtccgtctttgggttgtggtcctttccgtttc
ttccccaacatgtggtcagttgtcccgacgtctttctacaacctcactgaaactacacag
gagttcctcttcttcattggctcccagtcgttctccatccctctgtttgcattatcatgt
gtgctgatgtgttatttcatagccttggcctctgtctatgggaatagtgttgctcttcta
agagcgcagctaaaactggagggccgtgacaagcagttcttggtcaagcagatcgagcag
ctgggtcgacagcttcacatacccacacataatgcaggagtacaagactga
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