Hippoglossus stenolepis (Pacific halibut): 118114052
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Entry
118114052 CDS
T08308
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118114052 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118114052 (washc5)
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Others
WASH complex
118114052 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
118114052
NCBI-ProteinID:
XP_035020143
LinkDB
All DBs
Position
8:complement(8984158..8996996)
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPSVFRLKDKSDQQKYGDIVCDFSY
FKGPEYYEGKLEAKPDLQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLYEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSGD
SNLDDICKLLRSTGFSSHPGAKRPANYPESYFQRVPISNPFVSMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFSPSILQTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKTALNYTLETANIKEQATRYAAGMESLRPQVQQLLKEGFLREEIILDNIP
KLLNCLRDCNVAIRWLMLHSAESAYDPNNKRLRQIKDQVLNDSKYKPKILFQLLLDTAQF
EFTLKEMFKQMLSEKQIKWESYQKEGSERMMELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQICQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSADLLSVSQFYSGELVSYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDK
LKDYSQLGARYEVAKFTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHKGLIFNPKSKPSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNNFLRTKIQDWESVHQSTHIPIPKFPSVDESATFIGRLCREILRITDPKITCYI
EQMNTWYDLKSHQEVTNNRLFSEIQNTLGTFGLNGLDRLLCFMIVKELQNFLTMLQKTIL
RDRAMVDVLKAMLGAVNPIQGIVANASKVYASAAAKTQKIWGAYLEAIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKDDNILLYEITASLEAA
GIHNPLNKIYITTKRLPYFPIINFLFVIAQLPKLQYSKNQGMTCKKAADPVDWPPLVLGM
LTLLKQFHSRYTQQFLALIGQFIRSVMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSR
KVAEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctggcagagaacaacctgtgtggccaagccatcctcaggatagtctcc
agaggaaacgccatcatcgccgagctcctccgcctctctgatttcatcccttcagttttc
aggctcaaggacaaaagtgatcagcagaaatatggagacattgtctgtgacttcagctac
ttcaagggccccgagtattacgaagggaagctggaagccaaacccgaccttcaagacctg
gatgaagagtttagagagaacaacattgagattctgtcgaggttctatctggctttcgag
agtgtccacaaatatatagtggatctcaacagatatttggatgacctatatgagggtgtt
tatattcagcagaccctggagactgtgcttctaaatgaggatggaaaacagcttctatgt
gaagctctgtatctgtacggagtcatgttgctggtcattgaccaaaagattgaaggggag
gtccgagagaggatgcttgtttcctactatagatacagcgctgctcgttcatcaggagac
tccaaccttgacgacatctgcaagctcctccgtagcaccggcttctccagccatcctgga
gccaaacgtccggccaactacccagagagctacttccagagagttcccatcagcaacccc
ttcgtcagcatggtcattgggaggctgcgctctgacgacatctacaatcaagtttctgcg
taccctctgccagagcatcgtagcacggcgctggctaaccaggcagccatgctgtatgtc
tgcctttacttcagcccttccatactgcagacccagcaggccaagatgagggagatagtg
gacaagtacttccctgacaactgggttatcagtatctacatggggatcacagtgaacctg
gtggaggcctgggaaccgtacaaagctgccaagactgctctcaactacactctggaaact
gctaatatcaaagagcaggccactagatatgcagcgggcatggagtccctgaggcctcag
gtgcagcagctgctgaaggaaggtttcctgagggaggagatcatcctggacaacattccc
aaactgctcaactgtctgagggactgtaacgtcgccatccgctggctgatgctgcactct
gcagagtctgcctacgacccaaacaacaagcgtcttcgtcaaatcaaagatcaagtgctc
aacgactccaagtacaaacccaagatccttttccagcttctgctggataccgcccagttt
gagttcacgctcaaagagatgttcaagcagatgctgtcagagaagcagatcaaatgggag
agctaccagaaggagggatcagagagaatgatggagctggccgaagtcttctccggcgtc
aaaccgctcaccagggtggagaaaaacgagaacctacaagcctggttcagagaaatctca
aagcagatcgagtctttaaactatgaggactctacggctgccgggaggaagacggtgcag
ctcatacaggctctggttgaggtccaggagttccaccagttggagtcgaacctgcagatt
tgtcagttcctggctgacaccaggaagttcctgcaccagatgatccgcaccatcaacatc
aaagaagaagtcctcatcaccatgcagatagtcggagacctgtcgtacgcatggcagata
attgacagcttcacatccataatgcaggagagcatcagagttaacccgtccatggtcaca
aagctgagagctacatttctgaagctggcatctgcactggatctgccgttgctccgaatc
aaccaggccaacagtgctgacctgctgagtgtttcccagttctactctggagagttggtg
tcttatgtcagaaaggtgcttcagatcatcccagaaagtatgttcacttctctggccaag
atcatcaagcttcagatccacgacatcatggaagtgcccacccggctggacaaggacaag
ctgaaggactactcccagctcggggcgcgctacgaggtggctaaattcacccatgacatc
tccattttcactgaggggatcctgatgatgaagaccactcttgttgggatcattaaggtg
gatcctaagcagcttctggaggatggcatcaggaaggagctggtgaagagggtggcctat
gccctgcacaaaggattgatcttcaaccccaagtctaagcccagtgagctgatgcccaag
ttgaaggacatggcggccaccatggacgggttctacaggtcgtttgagtacatccaagac
tatgtcagcatttatggccttaaaatctggcaggaggaagtgtcacgcatcatcaactac
aatgtggagcaggagtgcaacaacttcctcaggaccaagatccaggactgggagagtgtg
caccagtccacccacatccccatccccaagtttccctctgtggatgagtctgccaccttc
atcggtcgtctctgcagagaaatcctccgaatcaccgatcccaagataacttgctacatt
gagcagatgaacacctggtacgacctgaagagccaccaggaggtgaccaacaacaggctg
ttctctgaaatccagaacactctgggaacatttggcctcaacggactggaccgtctgctc
tgcttcatgatcgtcaaggagctgcagaacttcctgacaatgcttcagaagaccatcctg
agggacagagcaatggtggatgtcttgaaagcaatgctgggtgctgtcaacccaattcag
ggaattgtggctaatgccagcaaagtgtacgccagcgctgcggccaaaacacagaagatc
tggggcgcatacctggaggccatcatgaaggttggtcaaatgcagattctcagacagcag
atcgctaatgagctgaactactcatgcaagtttgactccaaacacctggctgctgccctg
gagaacctcaacaagtctctgctggccgacatcgaagctcactaccaggacccatccctg
ccgtacccaaaagacgacaacattcttctgtacgagatcactgcttctctggaggctgcc
ggcattcacaacccgctcaacaagatctacatcaccaccaagcgcctaccttactttccc
attatcaacttcctgtttgttattgctcagctgcctaaacttcagtacagcaaaaaccaa
ggaatgacgtgcaagaaagccgcagacccggtcgactggcctccgctggtgctcggcatg
ctcaccctccttaagcagttccactccagatacacacagcagttcttggctcttattggt
cagttcatccgctcagtcatggagcagtgcacaagtcagaaaatccctgacatgccctct
gatgtggtgggagccctgatgttcctggaagactatgtgaagtacacaaaactgtcacgc
aaggtggctgaagctcatgtgcccagtttcatttttgatgagttcagaacagtactgtga
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