Hippoglossus stenolepis (Pacific halibut): 118114068
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Entry
118114068 CDS
T08308
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118114068
Cilium and associated proteins [BR:
hsp03037
]
Other cilia and associated proteins
Stereociliary proteins
118114068
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
118114068
NCBI-ProteinID:
XP_035020172
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Position
8:complement(2375729..2381143)
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AA seq
260 aa
AA seq
DB search
MMMSGLAVGRLLLLLACLALPLYGVEKVRNRGYRKDPDADKCNGGNDAEKANCTSHSGER
RSAHLSNTFGSCMQGPGGPTGREGNPGANGIPGTPGIPGRDGLKGEKGECISEIFEEPWK
PNYKQCAWNSLNYGIDLGKVADCTFTKMRSDSALRVLFSGSLRLKCKNACCQRWYFTFNG
AECTGPLPIESIIYLDQGSPELNSTINIHRTSSVEGLCEGVKAGLVDVAVWVGTCADYPR
GDASTGWNSVSRVIIEEMPK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtctgggctggctgttggccgcctgctgctgctgctcgcatgcctggctctg
cctctgtatggcgtggaaaaggtgagaaatagaggataccgaaaggatcccgacgcagac
aagtgcaatggtggaaatgatgcagaaaaggccaactgcactagtcactctggagagagg
agatctgctcatttgagcaacacgttcggcagctgcatgcaggggccaggaggccccact
ggcagagaaggtaaccctggggccaacggcattccggggacaccgggcatccctggccgc
gacgggctcaaaggtgagaaaggcgagtgcatcagcgagatcttcgaggaaccctggaag
cccaactacaagcagtgtgcctggaactctctgaattatgggatcgacctgggtaaagtg
gcagactgtacgttcaccaagatgcgttcagacagcgccctcagagtcctcttcagtggc
tccctcagactcaagtgtaagaacgcgtgctgccagaggtggtacttcaccttcaacgga
gccgagtgtactggacccctgcccatagagtcaatcatctacttagaccagggaagccca
gagcttaactcaaccatcaacattcacagaacgtcctcagttgaaggcctgtgcgagggc
gttaaagctgggctggtagatgtggccgtgtgggtggggacctgcgctgactaccccaga
ggtgacgcatctacaggctggaactcagtatccagggtcatcattgaggaaatgcctaaa
taa
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