Hippoglossus stenolepis (Pacific halibut): 118114077
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Entry
118114077 CDS
T08308
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118114077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118114077
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
118114077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
MRI
Motif
Other DBs
NCBI-GeneID:
118114077
NCBI-ProteinID:
XP_035020187
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Position
8:complement(19762320..19777456)
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AA seq
725 aa
AA seq
DB search
MRKPVPQKAIEWKDARRIKHARSGRPSRVPSQYQGHFSWEKYLKETGAAAAPASCFKQSP
TPPVNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGSCEKSGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPAPEQNSFQMG
MKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTGD
NLQPPGTKVVLPKSLGALTDGSVETPAMHPTPTVGRPPGQRGRKPGRRKTKVTVPWGQKA
SALGPQSIQPSKDLEPIKIPKKRGPKPGNKLSWAKRAGWLEDAMAGPGRPATGPGRTRGR
LPANWTQTIALQQAQTQAQPIKIPKKRGPKPGSKRKPRVVPNPVPTSPTSSTPEPDTSTV
PLDNATIPNSALQAPTVCVYLNKYGKVGPHLDQRRIQQLPDHFGPGRASSVLQQCVQACV
DSAHNQSTVFSCLKSGQGGEVISAYFDEQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDAL
FGSQPVARGALHYNSHTYTTERRSFGDSLTTGPGNKRFLQNYNSPLPQKLAKISRHSTDG
ESFMENSVATSEHLKKSPLSPNSTALSPGLRSPTKLLHHNNFTGSLRESPRPSGQDPNLW
TVEDVMKYIREIDPVLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTFHID
KLKRQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacccgtaccacagaaagctatagagtggaaagatgccagaaggatcaagcat
gcccggagtggacggccctcccgggtgccttcacagtaccaaggacatttcagctgggag
aaatacttgaaagagaccggcgctgctgctgcacctgcttcatgcttcaaacagagtccc
acgcctccggttaacgagttcaaggccgggatgaagctggaggcccaggacccgcggaac
accacgtccacctgcatcgccacagtggtgggcctgacgggctcgcggctgcggctgcgt
ttggacggctccgacaacaagaacgacttctggcgcttggtggactcctcagagatccag
cctattggcagctgtgagaagagtggaggcatgctgcagcccccacttggtttccgtctc
aacgcttcctcctggcccatgttcctactgaaaacactaaatggagctgagatggcaccg
tctcgcatttttcacaagcaggagcctcccgcaccggagcaaaactcctttcagatgggc
atgaagctggaggcggtggaccggaaaaacccccactttatctgtccagccacagtgggt
gcgctgcgtggtgttgaggtgctggtcacctttgatggctggcggggggcctttgactac
tactgccgctacgactcacgcgacatcttccctgttggctggtgctcactcaccggagac
aacctccagccgcctggtaccaaagtagtgttgcctaagagtcttggggcgttaacagat
gggagtgtagagactccagccatgcaccccaccccaacagtgggcagacctccgggtcag
agagggcggaagccaggccggaggaaaaccaaggtcacagtgccctggggtcagaaggct
tcagccttgggaccacagagcatccagccgagcaaagaccttgagcccatcaagatcccc
aaaaaacgagggcccaagcctggcaataagctgagctgggcaaagagagctggctggctg
gaagatgccatggctggcccgggacggccggcgacaggccccgggcgaaccaggggcaga
ctgccggccaactggacacagacgatagctctgcagcaggcccagactcaggcacaaccc
atcaagatcccaaagaaacgagggcccaagcctggcagcaagagaaaaccacgcgtggta
cctaatccagtccccacgtctcccaccagcagcaccccagagcccgacaccagcactgtg
cctctggacaatgccaccatccccaactctgcactacaggctcccacagtttgtgtctac
ctaaacaagtacggcaaagtgggaccccatttggaccagcggcggatccagcagctcccg
gaccattttgggccaggccgagcgtcctcggtgcttcagcagtgtgtccaggcttgtgtg
gactccgctcacaaccagagcaccgtcttctcttgccttaaatccggccagggtggtgaa
gtcatttctgcgtactttgacgagcagcagcacaccctgaccctgcccacagtcagcagc
gtcacctacgtcctccgcttcctggaaaagctttgccacaaccttcactgcgatgcgctg
tttggcagccagcctgttgccagaggagctctgcactacaacagtcacacgtacacgaca
gagaggagaagttttggtgacagcctgacgacgggcccgggcaacaagaggttcctccag
aactacaacagtccgttaccacagaaactggccaaaatctcccgacactccaccgatggt
gagtccttcatggagaacagcgtcgccacatccgagcacttaaagaaaagccccctctct
ccaaactctacggctttgtcaccgggtctcaggtctcccaccaaactgctgcatcacaat
aacttcacaggcagtttacgggagagcccgagacccagtggtcaggaccccaacctgtgg
acggtggaggacgtcatgaagtacatcagagaaatcgaccccgtgctggcaccacacgct
gacctttttagaaaacatgagattgacggcaaggcactcctgttgctgcgtagcgacatg
atgatgaaatatatgggcttgaagctcggccccgccctcaaactcaccttccacatcgac
aagctcaagcggcagtga
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