Hippoglossus stenolepis (Pacific halibut): 118114141
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Entry
118114141 CDS
T08308
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118114141 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118114141 (ubr5)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118114141 (ubr5)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
HECT type E3
118114141 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
118114141
NCBI-ProteinID:
XP_035020289
LinkDB
All DBs
Position
8:complement(1678319..1713487)
Genome browser
AA seq
2863 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLSLLEQAPLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPDGSDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGGGSGGGAGGGGAGGGSSGGGGGGGAGGGGGTSGRSSTA
ARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRSVIIRELQ
RTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAM
FSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDT
ERGSTSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGAMFSEMVAVSSKGEL
YQWKWSEPEPYRNAQNPSIHHPRASFLGVANEKITLLSANSIRATVATETNKVATWVDDT
LSTVASKLEHSAQAFPELQGERMVSLHCCALYTCAQLENSLYWWGVVPFSQRKKMLEKAR
AKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVSAGIPKVGVLLESVWNMND
SCRFQLRSPESLKNMEKTTKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIASSASLP
YKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSMS
NQSTAAAAAAPTDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAE
ILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAIFTAG
QESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPPINSLGMGVHSLANLPSNSTIKKKAA
IIIMAVEKQTLMQHVLRCDYEACRQYLVNLEQAFLLDQGNQALGALLGHRCDGNRNILHA
AVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRG
LRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAP
AVGSLTTASTGTSQGPSTSTIPGPSTEPSVVESKDRKANAHLILKLMCDSVVLRPHLREL
LSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGITEKEDADSVFMEMICPSG
TNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCK
LKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTATNLVTTPNSRGEHILLFLVQT
VARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNALKSM
IMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFIDTLL
GTLVKELQNKYTPGRREEAVSVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCRR
VFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPR
PSPDQSNSSSQTAASYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGVAGEE
DHHDDQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSV
VTAATAGSEAGSRVSLAFPIFGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLL
DEPLERTTSASHANSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAASSTGLIYIDPTN
LRRSSAISSSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYS
QYPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHP
LHASQHSARRERMTAREEASLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMRSHND
EHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQIDRKRNREILELGLDNEDS
EHENDDDTNQSSTLQDKDEDPVTAETGQNHPFFRRSDSMTFLGCIPPNPFDVPLAEAIPL
ADQPHLLQPNARKEDLFGRPSQGLYSSSYMATKGLAEASMDRNCLEVNMGCSLPSPSQIL
PTKMSYSANLKNVMSMETGQRSTETQSLAEQELEASKPGPSPHDLAAQLKSSLLAEIGLT
ESDGPPLPSFRPHCSFMGMMISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFE
VKESKFRREMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKV
TFKDEPGEGSGVARSFYTAIALALLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQR
LRNRDRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPFRPSSEGNPSDEPDPLPAHRQAL
GERLYPRVHAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENG
ADSILDLGLLDTPEKTQQQENRKRHGSTRSVVDMELDDPDDGDDNAPLFYQPGKRGFYSP
RPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMY
ESLRQLIRHSQAGEADAVFAAMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVR
KYAEHRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSF
NDESGESADKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRP
PDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8592 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatacacttcgtggttcacccgttgcccgggaccgaggatcagctcaatgac
aggctccgtgaagtctcggagaaactcaacaaatacagctataacagtcatccacacctc
agtttgctggagcaggcccccctgaagcagtgcgttgttggtccaaaccatgccggattt
ctccttgaggatggacgtgtgtgtagaatcagctttgctgtccagcctgatcgcctggag
ctcagcaaaccggatggcagcgatggttcaaagttgagcagtggttcagggacaggaagg
agctccaggccaggcaggactagtgatccgccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctctggtgtaaatggaggcagt
ggaggaggtggaagtggtggtggagcagggggcggtggagcaggaggtggaagcagtgga
ggtggagggggcggcggagcaggaggaggtggaggcacgtcgggcaggtcgtcaacagcg
gctcgcgattcccgccgacagaccagggtgatccgtacaggaagggatcgtggctcgggt
cttctgggcagccagccacagccagttataccagcttctgtcatccctgaagagctcatt
actcaggcccaagtagtccttcaggggaagtccaggagtgtgatcattagagagctacag
aggaccaacctggatgtcaaccttgctgtcaacaacctgctgagtcgggatgatgaagat
ggagatgatggagatgacacggccagcgagtcctacctccctggagaggacctgatgtcc
ttgttggatgcagacattcactctgcccatcccagcgtgattattgatgctgatgccatg
ttctctgaggacatcagctactttggctacccctcttttagacgttcctcactgtctcgc
ctgggatcctctagagttctccttcttcccttagagcgtgactcagagctgttgcgtgag
cgtgagtctgtattgaggttacgcgagcgccgatggctggacggggcctcgttcgacacg
gagcgaggctccaccagccgtgagggcgagcccagcctggacaagaagagcatcccagtc
cagagtcctgtctccctgggagaggagctccagtggtggcctgacaaggatggtgtgaag
tttgtgagcattggagccatgttctctgagatggtggctgtcagctcgaaaggagagctt
tatcagtggaagtggagtgaacctgaaccctacaggaatgcacagaatccttccattcat
catccacgtgcatcatttctgggtgtggccaatgagaagatcactttattgtctgccaat
agcatcagagccactgtagctacagagacaaacaaggttgcaacctgggtggacgacaca
ctgagcacagtggcctctaagctggagcacagtgctcaggctttccctgagctgcaggga
gaacgcatggtgtcactgcactgctgtgcactatacacgtgtgcacagctggagaatagc
ctctattggtggggtgtcgtgccttttagtcaacggaagaagatgctcgaaaaggctaga
gccaagaacaaaaagccaaagtccagtgctggcatctcctcaatacccaacatcaccgtg
ggaacacaggtgtgcttgaggaataaccccctctaccatgccggtgcagtggccttttct
gtcagtgctgggatcccgaaagtgggtgtccttttggagtctgtgtggaacatgaacgac
agctgcaggttccagctgcgctcaccagagagcctcaagaacatggagaagaccactaag
actcaagaaatcaagactgaaagcaagccagagctggtgaagacagagatgggtcctcct
ccctccccagcgtctacctgcagtgatacctcttctattgctagcagtgcctcactgccc
tacaagcgaaggcgttctactccggcacccaaagaggaggagaaggtgaatgaggagcag
tggcctctcagagaggtggtgtttgtggaggacgttaaaaatgtcccagtgggaaaggtg
ctgaaagtggatggtgcatatgttgctgtcaagtttccagggacatcaagcagcatgagc
aaccagagtactgctgctgctgctgctgctcccactgactccgacccatcatcactgctg
caggactgtagactcctcagaatagatgagctgcaggtggtcaaaaccggtgggactcct
aaagttcctgattgttttcagcgcacacctaaaaaactctgtatcccagaaaaggcggag
attctagctgtgaatgttgactccaaaggagttcacgcagtgctgaaaactggtaactgg
gtaaggtactgtatctttgacctagccacaggcaaagctgaacaggagaataacttccct
actagtaacctggccttcttggggcagagtgagcgcaatgtggccatctttactgcagga
caggagtctcctatcatactccgagatggaaatggcacaatctaccctatggccaaagac
tgcatgggtggaatacgagatcctgattggcttgacctgccacctataaacagcctggga
atgggggtgcactctctggccaatctcccctcgaactccaccattaaaaagaaagctgct
attattattatggctgtcgagaaacagacgctgatgcagcatgtgctgcgttgtgactat
gaggcgtgtcgacagtacctggtgaaccttgagcaggcgttcctgttggatcagggcaac
caagccctcggagcacttctgggtcaccgctgtgatggaaaccgcaacattctgcatgct
gctgtctctgtctgcttccctgttagtaataaggagaccaaagaggaggaagaagctgaa
aggtcggagagaaacacatttgcagagcgcctgtctgctgtggaggcgattgccaatgcc
atttctgtggtttcaagcaacagctctggaaataggactggctcctccagcagcagaggt
cttcgtctgagggagatgatgcggcggtctttaagagccgctggtcttggccgccatgag
tccggcccgtcatccagtgaccaccaggaccctgtgtcaccacccattgccccaccaagc
tgggtccctgacccgccacccatggaccctgatggtgacattgacttcattctagcacca
gctgtgggttcactcaccactgcctccactgggacaagtcagggacccagcacctccacc
ataccaggaccgtccactgaaccatctgtggttgaatctaaagacaggaaggccaacgcc
caccttatcctcaagctgatgtgtgacagtgttgttctgaggccacacctacgggagttg
ctttctgcaaaggatgccagaggaatgactccattcatgctggctgtcagtgggagagcc
tacccggcagccatcactgttttggaggctgctcagaaaatggcaaaggtgggtgaccca
ggcattacagagaaggaggatgcagactctgtgttcatggaaatgatttgcccttctggg
accaatccagatgactcaccactgtatgttctttgctgcaatgacacctgcagtttcact
tggactggagctgagcacattaaccaggatatctttgagtgtcgaacctgtggtttgctg
gagtccctctgctgctgtactgagtgtgctagggtctgtcacaaaggacatgactgcaag
ctgaagaggacctctcccacagcatactgtgactgttgggagaaatgtaagtgtaaaaca
cttatcgctggccagaaagctgctcgtctcgacctgctgtacaggctactcacagccact
aacctggtcacaacacccaacagcaggggagagcatatattgctgttcttggtgcagact
gttgccaggcagagtgttgagcactgtcagtatagaccaccacgcatcagagaagacagg
aatcgcaaggctgctaatgcagaggactctgatatgccagatcatgatctagaacctccc
cgctttgctcagctggccctggagagggttctgcaggactggaatgccctcaagtctatg
atcatgtttggttctcaggagaataaagacccacttagtgccagcagcagaattgctcac
cttctgcctgaagagcaagtctacttgaaccagcagagtggcaccattcgccttgactgt
ttcacccactgcctcattgtcaaatgtgcccctgacatcactttcatagacaccttgctg
ggcacactggtgaaggagctgcagaacaagtacactcctggcagaagagaggaggcagtc
agtgtcaccaggaggttccttcgctctgtagcccgggtgtttgttatcctcagtgtggag
atggcttcctccaagaagaaaaacaacttcatcccccagcctatcgggaaatgtcggcga
gtttttcaggcgctcttaccctacgctgtggaggagctgtgtaacgtagccgagtcgctg
attgttccagtacgaatgggtattgcacggcctactgctcctttcactttggccagcacc
agcatcgatgctgttcagggcagcgaggagctcttctctgttgaacctctccctccaaga
ccctcacctgaccagtccaacagttccagccagacagctgcctcttatatcatcaggaac
ccccaacctcgacgcagcagccagtctcagcctgtgagagggagagatgaagagcaggat
gacattgtatcagcagatgtagaagaggttgaggttgtagagggggtagcgggggaggaa
gaccatcatgacgaccaagaggaacagggagaggaaaatgcagaggcagaaggacagcat
gatgaacatgatgaggatggaagtgacatggagcttgatctgctggcagcagctgaaacg
gagagcgacagcgaaagtaaccacagcaatcaggataatgctagcggccgcaggagcgtt
gtcacagcagccactgctggctctgaagcaggcagtagggtgtccttggcatttcctatt
tttggtgccagcagtgtccctgccttcttttcagaggatgactcccagtccaatgactcc
agcgactctgacagcagcagcagtcagagcgacgatgttgaccaggaaactttccttttg
gacgaaccactggaaagaacaactagcgcatcacatgccaatagtgcagcccaggctcct
cgctccatgcagtgggctgtaagaaacacccccagccagagggccaccggaagtgccccc
tccagctcctcaacaccagctgcaagctccacgggcctgatatatattgatcctaccaac
ctgcgtcgctccagtgcgattagctccagtgccgctgcggcggcggcggcgctagaggcc
agcaactccagcagttatctgacatctgccagcagcctggcccgggcctacagcattgtt
atcaggcagatctctgacctcatgagtctaattcccaagtacaaccatctagtctactca
cagtaccctgctgctgtaaagctcacctaccaggatgcagtcaacctgcagaactatgtt
gaagagaagctgattcccacctggaactggatggtgtccatcatggattccactgaagct
cagttgcgatatggctcagccctatcatctgctggagaccctggtcaccccagtcaccca
ctccatgcctctcagcactcagctcgcagggaacgcatgactgctcgagaagaagccagc
ctccgcaccctggaaggacgcaggagagcagccactctgttgactgctcgccaaggcatg
atgtcggcacgaggcgatttcctgaactacgctttatcactgatgcgctcccacaacgat
gagcattctgacgtgcttcctgtactggacgtgtgctcactgaagcatgtggcctacgtc
ttccaggctctaatctactggattaaggccatgaaccagcagaccacactagacacccca
cagatcgatagaaagagaaatcgagagatcttggaactgggtttggacaatgaagattct
gaacacgagaatgatgacgacacaaatcaaagttcaactctgcaggacaaggatgaggac
ccggtaacagctgaaacgggtcagaaccaccccttcttccgtcgctctgactctatgacg
tttctgggctgcatcccacccaaccccttcgatgttcccctggctgaggccattccactg
gcagatcagccccacctcctgcagcctaatgccaggaaggaggatctatttggtcgtccc
tctcagggcttgtattcctcctcctacatggcaaccaaaggcctggctgaggcaagcatg
gacaggaactgcctggaggtaaacatgggctgctctctaccctccccctctcagatcctg
cccactaagatgtcgtactcggccaatctgaaaaatgtgatgagtatggaaacaggccaa
cggagcacagagacccagtcactggctgagcaggagctggaggcttcaaaacctggtcct
tcaccacatgatctcgctgcccagctgaagagcagcctgctcgctgagattggcctcact
gagagcgacggaccacctctcccatcgttcagacctcactgtagtttcatggggatgatg
atctcacatgacatgctactaggccgctggcgtctgtcattggagctctttggtcgcgtc
ttcatggaagatgtgggagctgagcctggatctatcctcacagagctcggtggctttgaa
gtaaaggaatccaagttccgtcgggagatggagaagctgaggaacctgcagtcccgtgac
ttggccctagaggtggaccgggatcgagaccagcttatacagcagaccatgcgtcagcta
aatacgcactttggcaggcgttgcacaaccacacccatggctgtacaccgggtgaaggtc
accttcaaagacgagccgggcgagggcagtggtgtggcacgcagcttctacacggccatt
gccctggctctcctctccaatgataaattgccaaacctggactgtgttcagagtgtcagc
aagggcatgcaggccagcagtacgtgtcatcacgattacaattcaaatctaatgcagcgt
ttgaggaacagagaccgcgaaagagagcgacgaagtggagggcttcgagcgggttcccgc
agagaccgagacagagactcaaggaggcagctgtccattgacacaagacctttcaggccc
tcatcagagggcaaccccagtgacgagcccgaccctctgcctgcacacagacaagctctc
ggggaaaggctctacccacgcgttcatgcaatgcaaccggcgtttgccagtaaaatcaca
ggcatgttgttggagctgtctcctgctcagctgctgctgctgctggccagtgaggattct
ctcagagccagagttgaagaggctatggagcttctcattgcacatggaagggaaaatggt
gctgacagtattttggacctgggtctccttgacacaccggagaaaacacaacagcaggag
aaccgtaagcgtcatggttcaacccgcagtgtggtggacatggagctggacgacccagat
gatggagacgataatgctcctctcttctaccagcctggcaaacgaggcttctactcacca
cggcctgggaagaacacagaggccagactcaactgcttccgaaacatcggcagaatacta
gggttgtgtctgctgcagaacgagctctgcccgatcacgttgaacagacatgtcatcaaa
gtgctgcttgggaggaaggtgaactggcatgactttgcattctttgacccagtcatgtat
gaaagcctgcggcagctgatccgccattcacaagcaggtgaagcagatgcagtatttgct
gccatggacttggcctttgccattgacctctgcaaagaggaaggagctggacaggtcgag
cttctgtctggtggggtcaacatgccagtgacgcccctcaacgtgtatgagtatgtgagg
aagtatgcggagcacagaatgcttgttgtggcggagcagcctctccatgcaatgaggaag
ggtttgctggatgttcttcctaagaacgccctggaggacctgacggccgaggacttcagg
ctgctggtcaatggctgtggggaagtcaacgtccagatgctcatcagcttcacctccttc
aatgatgaatctggggaaagtgcagacaaactactgcagttcaaacgatggttttggtcc
atagtggagaagatgagcatgactgagaggcaagatctggtgtacttctggacctccagc
ccgtctctcccagccagcgaggagggcttccagccgatgccctccatcaccatccggcct
ccagatgaccagcacctccccacagccaacacttgcatctcacgtctctacgtgccactc
tattcttcaaaacagatactcaaacagaaactcctgctagccattaagaccaagaatttt
ggttttgtgtag
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integrated database retrieval system
