Hippoglossus stenolepis (Pacific halibut): 118114167
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Entry
118114167 CDS
T08308
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118114167
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
118114167
NCBI-ProteinID:
XP_035020340
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Position
8:13569772..13582425
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AA seq
824 aa
AA seq
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MKSNQERSNGCLPPKKREILALEQRPVVIATAPPPAAMVADSPHTENLAWLASVASERCR
SRDAESPRCLISSSSPSMSAPSSTTPLSAMPLASLPAVYSTALPQQAGTIQFAQLGPNVQ
FISSGPYAGYISSHIISTNSSSVPNSSTIVGQRPHLDGYTTALVSPNTKGEQHFQIGLSP
TELTPVSLPSSPQVTSQYIHLDSRTPLTVSGNSVNSPAAHLQLHPHTASFPQTLTLTPSQ
LVVQYADGSFGKKPEGHAKGLLNGEMELVKQAKAHSYPANHHQVQSYEARHILLPADYGQ
NPTGLQTSLVLVAQPNHGEEHDAGSNKISLVQTEKGGICLGKPVSRSSSFTSFSSSELMK
SVAPHTVIQTTLPSEELPASLYSSTQPPIIGYITSSNQHAVSYHAALPQHLVIPSGQSLF
IPVSGTNNGIEMEVSRTVSALTATTTPQISTAMPHAYLATALSRCEALGQDGHQPHPAAA
HAPVLPVLPSNPAPAVLAAPSPTPAPPPAPVPTPAPVSIQASPSISSSSSSPVALPPFFM
RGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDSGQSPNAVVIQFSVGE
LKAQVCVEVLVEYPFFVFGQGWSSCCPDRTTQLFELSCAKLCVGDVCVSLTLRSLRNGSA
TDGQALAAKLKTSHLSDYCHSVEATVRNSLSPNAGGNSGLLMKASSGERLERKQVAGPGL
GLVPGSADGFYGAGPVLTVSGTGEVRQESVKTDMPALTRQCELERPATRKRRWSAPERDQ
TERAEDEPPPTLPKPSFVPHEVKISIEGHSSTGSERFLSRRVDC
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaccaagagcggagtaacggatgcctgcctcctaagaagcgtgagatcctg
gctctggagcagaggccagtggtcatagccacagctccacccccagcagcaatggtggcc
gatagtccccacacggagaacttagcgtggttggcaagtgtagccagtgaacgttgcagg
tctcgggacgcagagagcccaagatgtctcatctcctcctcttctccttccatgtctgca
ccttcctcgaccacccctctgtccgcaatgcccctggcctctctgcctgcagtttactcc
acagccctcccccagcaggctgggactatccagtttgctcagctgggacccaacgttcag
ttcatcagctccgggccttatgccggctacatctcctctcacatcatctccacaaattct
agctctgtgcctaacagctccaccatagtaggacagcgtcctcacctggacggatacacc
actgccctcgtctcccccaacaccaaaggggagcagcactttcaaataggcctctccccc
acagaattgacacccgtgtcgctcccaagctctccccaagtcaccagccagtacatccat
ctggacagcagaacacctctgaccgtcagcggaaactccgtcaattcacccgcagcccac
ctccagctccaccctcacacagccagtttcccacaaacacttaccctcactccctcccag
ttggtggttcagtatgcagatggctcctttggaaagaagccagaggggcatgctaagggt
ctactgaatggggaaatggagctggtcaagcaggcaaaagcccacagctatccagcaaac
catcaccaggtccagagctatgaggccagacatatccttctgcctgcagactatggccaa
aaccccacaggactccagacctccttggtgctggtggctcagcccaaccacggagaggaa
catgacgctggctcaaataagatctccttagtccagactgagaagggaggcatctgcttg
gggaaaccagtgtccaggtcctcctctttcacctccttctcttcctcagagttgatgaag
tctgttgctcctcacacagtcatccagaccactctgccctccgaggagctgccagccagc
ctctattcctctacacagccacccatcattggttatatcaccagttcaaaccagcatgct
gtcagctaccatgcggcgctgccccagcacctggtgatcccgagtggccagtccctcttc
atcccagtcagcggcaccaataacggcatagaaatggaggtcagtcgtactgtcagtgcc
ctgactgctaccactacccctcaaatatccaccgccatgccgcatgcatatctagccaca
gccttgtccaggtgtgaggcacttgggcaagatggacatcaaccacaccctgctgccgca
catgctccagtgctgccagtcctgccctcaaacccggcaccggcagtgttggcagctccc
tccccgactcctgctccccctcctgcccctgtcccaaccccagcccctgtttccatccag
gcctccccctccatttcctcctcctcctcctcgcctgtggcgctccctccattcttcatg
cgaggctccatcatccagctggctgacggggagctgaagcgcgtggaggacctaaagacg
gaggacttcatccagagtgctgagattagcagcgagctgaagatcgactccagcactgtt
gagcgcattgacagtgggcaaagccccaatgctgtggtcatacagttttctgtgggcgag
ctcaaagctcaggtgtgtgtggaggtgctggtggagtaccccttctttgtgttcggtcag
ggctggtcgtcctgctgccccgaccggaccacccagctgtttgagctgtcctgcgctaag
ctgtgcgtgggcgatgtgtgcgtgtcgctgaccctccgcagcttgaggaatggttcggcg
acagacggccaggctttggcggccaagctgaagacgagtcacctctctgactactgccac
agtgtggaggccactgtcagaaacagtttgagcccaaacgcaggcggtaacagcggcctt
ctaatgaaggcgtccagtggagagaggctggaaaggaaacaggtagctggaccgggactg
ggactagttccagggtcagcagacgggttctacggagctggaccggtgctgacagtctca
gggactggagaagtaagacaggaatcagtgaaaacagacatgcctgctcttaccagacag
tgtgagctagagagacccgccacccgcaagaggcgctggtcggctccggagagagaccag
actgagagagccgaggacgagcctcctccgactctgcccaaaccctctttcgtcccgcac
gaggttaaaatcagcatagagggccactccagcactgggagcgaacgcttcttgagcaga
agagtagactgttaa
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