Hippoglossus stenolepis (Pacific halibut): 118114172
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Entry
118114172 CDS
T08308
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118114172 (sntb1)
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PH_9
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118114172
NCBI-ProteinID:
XP_035020348
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Position
8:11804097..11841883
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AA seq
552 aa
AA seq
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MVFERNAPKMAVVVAGSSGVPKSGFVEVLVREQWHKVLANLNEEALTLSCEEGDGVSDNV
NSNGVTNGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVCKQEIGGLGIS
IKGGKENKMPILISKIFKGLATDQTQALYVGDAILSVNGMNLRDATHDEAVQALKRAGKD
VTLEVKYMREATPYVKKGSPVSEIGWETPPPESPRIGSPPITSPSSSDPSNPTTQPSLSP
LGDRRCIPLKMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHSVT
STLAQRALAEVIQDTARTGIGSREIRHLGWLAGKTESEKQSWRPVLVVLTEKDLLLYDSL
PRSKEAWQGPEHTYPLLATRLVHSGPDRGSPHSGTELYFATRTGTRLGIETHLFRAETTK
DLSLWTRHIVNGCHASAEMIKEVTTSCMYQSQECRLVIHYEQGFSVLADPKLDDGENGDA
GGAHTPTRPRVLLSYPYEKLKMSSDDGVRMLSLDFGGKEGEIQLDLHSCPKPIVFILHSF
LSAKIARLGLVA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgagagaaatgctccaaagatggcggtggtagtcgcgggttcctccggagtg
ccaaaaagtggattcgtggaggtgttggtgcgggagcagtggcacaaagttttggccaac
ttgaacgaggaagcgctcacgctgagctgcgaggagggcgacggcgtgagcgacaatgtc
aactccaacggcgtcacgaacggatcctacctggacaacaacaacaccaactccaacaac
ggcccccagaccgtgcgcaccgcgttcacggacctcccggagcgagtgcccgaggcgatc
gccaaccgaaagcggtgcgtcaaggtgtgcaagcaggagatcggcgggctggggatcagc
atcaagggcggcaaggagaacaaaatgcccatcctcatcagtaagatcttcaaggggctc
gcaacggaccagacccaggctctgtacgtcggggacgccatcctgtccgtgaacggcatg
aacctgcgggacgcgacccacgacgaggcggtgcaggcgctgaagcgggccgggaaagac
gtgactctggaagtcaagtacatgcgcgaggcaacgccgtacgtcaaaaagggctcccct
gtgtcagagatcggctgggaaaccccccctccggagtctccccgcatcggcagccctccc
atcacctccccctcctcatccgacccttcgaaccccaccacccagccctccctgtctccc
ctcggtgacagaaggtgcataccgctcaagatgtgttgtgtaacccgagcaatgaccacg
ccagaccctgagaacagacaactggagctgcactcccctgacgccaggcacactgtggtg
ctgcggtgcccggatcaaccatctgccctgtcctggttctctgccatgcactctgtcaca
tccacactggcacagcgggcactggcagaggtcatccaggacacagccaggacgggaatt
ggcagcagagagatacgacacctgggatggttggcagggaagacagagagtgagaagcag
agctggaggccggtgctggtggtgctgacagagaaagacctgctgctgtacgacagtcta
ccacgaagcaaggaggcctggcagggtccggaacacacttatccacttttagcaacacgc
ctggtccactctggtcctgaccgggggtcccctcactctggcactgagctgtatttcgcc
actcggaccggcacacgactcggcatcgagactcacctgttccgggctgagacgaccaag
gatctgtccctgtggaccagacacatagtgaacggatgtcacgcctccgctgagatgatc
aaagaagtcacgacgagttgtatgtaccagagtcaggagtgcaggctggtgattcactac
gaacagggcttctctgtgctggctgaccccaaactggacgatggggagaacggggacgcg
ggaggagcgcacactcccaccaggcccagggtgctgctctcctacccctacgaaaaactc
aagatgtcctcggatgacggagttcgcatgctgtccctcgactttggagggaaggagggg
gagattcaactggacctccactcgtgtccaaaaccgatcgtcttcatcctccactcgttc
ctctctgctaagatcgcccgcctgggtctggttgcctga
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