Hippoglossus stenolepis (Pacific halibut): 118114182
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Entry
118114182 CDS
T08308
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00900
Terpenoid backbone biosynthesis
hsp01100
Metabolic pathways
Module
hsp_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
118114182 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hsp01006
]
118114182 (fdps)
Enzymes [BR:
hsp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
118114182 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
118114182 (fdps)
Prenyltransferases [BR:
hsp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
118114182 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
DUF7645
Motif
Other DBs
NCBI-GeneID:
118114182
NCBI-ProteinID:
XP_035020364
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All DBs
Position
8:16541830..16547412
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AA seq
394 aa
AA seq
DB search
MRRLLSLLVKLPGKWRTVPPLKFKNTSPLVLCSSSLQADSTCNGTHSKKPLLSDPQLFEA
QFDELLTEVTERDLTDPVLADALRRMREVLVYNAPGGKRNRGLSVIGSLRELLPASKLTQ
DTVQRALVVGWCIELLQAFFLMSDDIMDSSVTRRGQPCWYKKDGIGLDAINDAFLMEGLI
YRLLRRHCRDQSYYVHLLELFTETSFQTELGQALDLMTAPPGQIDFNRFTMERYKAIVKY
KTAFYSFYLPVAAAMYMAGITSDEEHNNAKYILLEMGEFFQIQDDYLDCYGDPAVTGKIG
TDIQDNKCSWLVVTALEIMTAEQRAELETCYARHDEASIEKVKALYNTLQMPTLYHKYET
ESYQRLQKLIARHAQNLPHPIFLNFANKIYKRNK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtctgctcagcctgctcgttaagcttcccgggaagtggcggacggtgcctccg
ctgaagtttaaaaacacgtctccccttgtgctgtgctcctcgtccctgcaggcagacagc
acctgcaacgggacccacagtaagaagccgctgctgtcggacccgcagctgttcgaggcg
cagttcgatgagctgctgacggaggtgacggagcgggacctcaccgacccggtgctggct
gatgctctgcgcaggatgagagaggttttggtgtacaatgcccctggaggcaagaggaac
cgtggcctgtctgtgattggctcactcagggagcttctcccggcctctaagctcacccag
gacaccgtgcagcgggctctggttgttggctggtgcattgagttgcttcaggcatttttc
ctcatgtcggatgatatcatggattcatctgtgactaggagagggcaaccctgctggtac
aagaaggatggaataggtttggatgccatcaacgatgcgtttctcatggaaggattgatc
tacaggctacttcgcagacactgcagggatcagtcgtactatgtccacctgctggagcta
tttactgagacatcttttcagacagagcttggccaggctttggacctcatgacagccccc
cctggtcagatagacttcaacagattcaccatggagaggtataaagctattgtaaaatac
aagactgctttctactctttttacctcccagtggcagctgcaatgtacatggcaggaatc
accagcgatgaggaacacaataatgccaaatacatcttacttgagatgggagaatttttc
caaatacaggatgactacctggactgttatggtgaccctgctgttacaggaaagattggt
acagacattcaggataacaagtgcagctggctggttgtgacggccctggaaatcatgacg
gctgaacagagagcagagctggagacatgttacgcacgccacgatgaagccagcatagag
aaggtcaaagcgctgtacaacaccctgcaaatgccaacactgtaccacaaatacgaaact
gagagctaccagcggcttcagaagctcatcgctcgtcacgctcagaacctccctcacccg
atcttcctcaactttgccaacaaaatctacaagaggaacaagtga
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