Hippoglossus stenolepis (Pacific halibut): 118114303
Help
Entry
118114303 CDS
T08308
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04621
NOD-like receptor signaling pathway
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118114303 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118114303 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hsp04054
]
118114303 (nod1)
Pattern recognition receptors [BR:
hsp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118114303 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_4
LRR_6
NOD2_WH
AAA_16
NPHP3_N
AAA_22
ABC_tran
Roc
ATPase_2
RsgA_GTPase
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
118114303
NCBI-ProteinID:
XP_035020568
LinkDB
All DBs
Position
8:complement(7699991..7708719)
Genome browser
AA seq
939 aa
AA seq
DB search
MDQREEARCLNILTLHRELLVSRLRSLQCILDNLLACGFLCEEDVEIVQQTVTKTDQVRK
ILELVQCKGEEACEYFLFIIYKVCDAYIDLQPWLEEINFKPSSDIMLMSVENTDPISRYS
AKLRQEMSRDTCFIMSYGQQDETRLEELYTDSLMELLKDNNESLGFVESLDQLLGDHSIF
NPQGEIIYVIGDAGVGKSLLLQKLQNLWSKKQLQTDAIFFFKFRCRMFSIFKETEQISLR
DLLFKHNCHPDLDPDNEVFDYILRFPEKVIFTFDGYDEIQENLDLMNVPEVVSPEDKAHP
LQLLITLLSGKLLKNSQKILTARTGIELQSRVIRKKMVLRGFSPTHMKSYINLHFKEQEH
RKLVSDQLDASPHLCGLCSTPLFCWILFKSFSHLHTMHDSFHMPDSCITLTDIFLLLSEV
FFSRSTSPAPSLLKKSSRCASETFKLGLRPLAAFAKLALQGMERGTFICNRDEIAACGLR
EEDLPLGFLRPVSDCEASGSPADFEFLHITLQSFLAAFALLLDEEAAADSILKFFTECSR
KREPSCLLFNLCITGSSKHRQKKPFATNEHLQFTNLFLCGLLSKAHTGLMEHLVSPGLLK
KKQAVLKSYLSTGVKSHLRGLPHYTGEEGKKLHVMPNFLWMLRCIFETGSKEIAQLTAKG
ITANSIKLGYCNVYSGDCTALNFVLQHRQRLLGIDMDNNNIGDYGVKQLRPSFCKMTVVR
LCVNHLSDSSIEVLAEELCKHKVVEVLGLYKNHITDIGAKLVAKIIEECPKLRVLKIGEN
KITSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAAAFAEALRHHPNLTNLSLSANGITT
EGGRVLTEALKENSALRIFWLTQNELTDDAAPYFAELVKVNTGLIHLWLVNNQFTVNGIK
HLAEALAHNSVLDEIVVKGNQVSAEEEEQFNGEKRLRFH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagagaagaagccagatgcctgaacatcctcaccttacacagagagctgctg
gtgtcgaggctgaggagcctccagtgcatcctggacaacctgctggcttgtggcttcctc
tgtgaagaagatgttgagatcgtacaacaaactgtcaccaagacggatcaggtgcgcaaa
atcttggagctagtccagtgcaaaggggaggaggcctgtgaatactttcttttcatcata
tacaaagtgtgtgatgcatacatagacctgcagccatggctggaagagatcaacttcaaa
ccgagcagtgacataatgctgatgagtgtggagaacacagatcccatcagcaggtatagc
gcaaagttgaggcaggaaatgagccgggacacctgcttcatcatgtcatacggccagcaa
gacgagacccgtctggaggaactctacactgactctctgatggaactgttgaaagacaac
aatgaaagtctgggcttcgtggagagtctggaccagctgctcggagaccacagcatcttt
aatcctcaaggtgaaatcatctatgtgattggggacgctggagtgggaaaatccctcctc
cttcagaagctccagaacctctggtccaagaaacagctgcagacagacgccatcttcttc
tttaagttccgctgtaggatgttcagcatttttaaggaaacagaacagatctccctcaga
gacctcttgttcaaacacaactgtcatccagatctggatccagataatgaggtgtttgat
tacatcctgcgcttccctgaaaaggttatttttacatttgatggctacgatgagattcag
gagaatctggacctgatgaatgtccctgaagtggtgtcgccagaggacaaggcacatccc
ctccagctgctgatcaccttgctctccgggaaactgctcaaaaactcccagaagattctg
acggctcggacagggattgagctccagagcagggtgatcagaaagaagatggttctgcgg
gggttctctccaactcatatgaagtcctacattaatttgcactttaaggagcaggaacac
agaaagctggtgtcagatcagctggatgctagcccccacctctgtggcctgtgctccact
ccgctcttctgctggattctattcaagagctttagccacctgcacaccatgcatgatagc
tttcatatgcctgactcctgcatcacactcaccgacatctttcttctgctgtccgaggtg
ttctttagccgctcaacctcacccgctccgtctctgctgaagaaaagcagccggtgtgcc
tcagagacattcaaattagggcttaggccccttgctgcatttgccaagctggcacttcag
ggtatggagagaggcaccttcatttgtaaccgagatgagatcgctgcgtgcggtctcaga
gaggaggacctgcccctcggctttctccgacctgtcagtgactgtgaagccagcggaagc
cctgctgactttgaattcctccacatcaccctccagtctttcttggcggcatttgcgctt
ttgttggacgaggaggctgctgcagactccattctcaagttcttcacagagtgcagcagg
aaaagggaaccatcctgtctgctgtttaacttatgtatcactggctcctcaaaacacaga
caaaagaaaccatttgcaaccaatgagcaccttcagttcacaaatctcttcttgtgtgga
ctgctctctaaagctcacactggcctgatggagcatctggtgtctcctgggctactcaag
aaaaaacaggccgtgctaaaatcttacctgtccactggtgttaagtcccacctccgtggt
ttaccccactacactggcgaggaaggcaagaaactccatgttatgcccaacttcctgtgg
atgctgaggtgcatctttgagacggggagcaaagaaatcgctcaactgacagcgaaaggc
atcacagcgaattctatcaagctgggttactgcaacgtctactcgggtgactgcaccgcc
ctcaacttcgtactgcaacaccgtcagaggctcctgggcattgacatggataacaacaac
atcggtgactatggggtgaagcagctgaggccttcgttctgtaagatgacagtagtgaga
ttgtgcgtcaatcacctgtcagacagcagcattgaggtgcttgcagaggagctgtgtaag
cacaaggttgtggaggtcttgggactttacaaaaatcacatcacagacattggagccaag
ctggttgctaagataattgaggaatgtccaaagttgcgagttctcaagatcggtgaaaac
aagatcactagtgttggtgggagatatctggccagtgcaattcagaagagctcttcaata
tttgatgttggaatgtgggggaacagcatcggagatgaaggggcagcagcgttcgcagaa
gctttgaggcaccacccaaatcttaccaacctcagtctctcagccaatggcatcacaaca
gaaggtgggagggttttgacggaggctctgaaagagaacagcgccctcaggatattctgg
ttgacgcagaacgagttgactgacgatgcagctccatactttgctgagttggttaaagtt
aacacaggtttaatacacctctggttagtcaacaaccagttcactgtgaatgggatcaaa
cacctcgccgaggccctcgctcacaactcggtgctcgatgagatagttgtgaaaggaaac
caggtctctgcagaggaagaggaacagtttaacggggagaagaggctgcgcttccactga
DBGET
integrated database retrieval system
