Hippoglossus stenolepis (Pacific halibut): 118114367
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Entry
118114367 CDS
T08308
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
118114367
NCBI-ProteinID:
XP_035020706
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All DBs
Position
1:complement(7804694..7825219)
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AA seq
1116 aa
AA seq
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MGQRAALLLSELLLLLTASRTLLAVSFPEDSTPLDVVDAHFTRKYPVFRGRPSGNESQHR
LDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRDMCAVKGKHRD
ECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLELDGEEIYGLARCPFDSRQTNVA
LFAEGKLYSATVADFQASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFF
YREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDV
LQSVTDIIDINGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTPDSVWTA
YPEEKLPKPRPGSCAGHGPAASFKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKTR
VRYRLTSLAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTTSLSLNDSLLLEEIDVFNRAK
CLSNHEDDKRVLSLHVDKDTHSLYVAFSSCVIRIPLSRCERHTSCHKSCIASRDPYCGWK
SPGACERILPGVLTGYEQDVELGNTAHLGDCHAFLGSTSAPDYKSFGDPTSDMEFSSTPV
TVQPSVPIHPPLLIPTQSPSPGPGPELYGSGFVLQDDPATSHSLDSIPGGQEGVWDNQAG
ETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRHVHKDTESAPSCSDSTGS
FIKLNGLFDSPVKEYQTSIESPKLYSNLLSNGKDLNSPNGDTKTMILRESCQPPELAALP
TPESTPVLQQKGLQPINNQWERAQGKVSGPCKESNSSAAAKSPQFLLSSPAPPNANANPH
NPHLALGHSHIPSAVVLPNATHDHPNLEVVMCGDDTLPHSSEKKPKNPDSRGSRKEQKRS
VDARNTLNDLLKHLNDSVANPKAILQEGSGPRPRQHLTLEPMEELTELPPRVPSREASLY
SPSSSLPRHSPTKRVDVPMPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPN
GVTMGVSLSRQHSMNRGGYMPPTPPSRLDSHSGMMAAGLHSPHPSSMSRQSNYSGHGSLP
RTGLKRTPSLKPDVPPKPNGFSPQSPQMRVVNKYSY
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgcgcttctgctcagtgagctgctgctgctgctgacagcctcacgc
actctcctcgcagtcagcttccccgaggacagcacacccctcgatgtcgtcgacgcacac
tttacacggaagtaccctgtgttcagaggccggccctctggcaacgagtcgcagcatcgc
cttgactttcagctgatgaccaagatacaggacacactgttcatcgctggcagagatcag
gtgtacctagtcagtctgagagaatcctacaggaatgagatcattccttaccggaagcta
acgtggcgatcaggccaagctgacagagacatgtgtgccgtcaagggaaaacacagagac
gagtgccacaacttcataaaggtgctggttcccagaaacgacgacctggtgttcatctgc
ggtaccaacggcttcaaccccatgtgcagatactacaggctggataacctcgagttagat
ggagaagagatctatggactggcacggtgcccgtttgactccaggcaaaccaacgtcgct
cttttcgctgaagggaagctgtactccgccaccgtggctgacttccaggccagtgacgct
gtcatctatcgcagtatgggtgatggatcggccttgaggaccatcaaatacgactccaaa
tggctgaaagaacctcatttcctgcatgcagccgagtatgggaattatgtgtactttttc
taccgggagatcgcggtggagcacagcaatctgggcaaggttgtgtattctcgcgtggcc
cggatctgtaagaatgacgtcggtgggtcacagcgagtgctagagaagcactggacgtct
tttgtgaaggcgaggctgaactgctctgtgccgggggagtccttcttctacttcgacgtg
ctccagtccgtcactgacatcatcgacatcaacggggttccctcggtggtgggtgtgttc
accacacagatgaacagtatcccagggtcagcagtgtgtgccttctccatggccgacata
gaaaaagtattctggggtcggttcaaagagcagaagactcctgattcggtgtggactgca
tatccggaggagaagcttcccaaaccgcgacccgggagctgtgcaggtcatggtccagct
gcgtcctttaagagctccatcgagttcccggacgacaccctgcagttcatcaagtcccac
cccctcatggacacagctgtgccttccatcggggacgagccttggttcaccaagacacgt
gtcaggtacaggctgacgtcgctggctgtggacaacgaagcagggccccacaagaactac
acggtggtgttcatcggggcagagtcgggtgtcgtcctcaaggttttggccaagaccacc
tccttgtccctgaatgacagcctgcttctggaggagatagacgtcttcaacagggcaaag
tgcctgtctaaccatgaagacgacaagcgtgtcctctcgctgcatgtggacaaagacaca
cacagcctgtacgtggccttttcgagctgcgtcatccgcattcccctgagtcgctgtgag
agacacacttcctgccacaagtcctgcattgcatcaagggatccttattgtggctggaaa
tctcccggagcttgtgagaggatactgcctggtgttttgaccggatatgagcaggacgtt
gaacttggaaacactgctcacctgggagactgtcacgcgtttttgggctctacttcagcg
ccagattacaaatcatttggcgaccctacctctgacatggagttttcatctacgccagtc
actgtccagcccagtgtgcccatacaccccccactactcatacccactcagagccccagc
cctgggcctggtccagagctctacggctcaggctttgtgctgcaggatgacccagccacc
tcccattctttagactctatcccagggggccaagagggtgtgtgggataaccaagcaggt
gagaccaaccagatggtccacatgaacatcctcatcacctgcgtgtttgcagcttttctc
atgggcgctctcctagctggtttgattgtcttctgctaccgagactcattcctccgtaag
ccgagacacgtccacaaggacacagagtcggcaccatcctgctctgactccactggaagc
ttcatcaagctcaatggcctctttgacagtccagtaaaggaataccaaaccagcattgag
tcccccaagctgtacagcaatctgctgagcaatggcaaagacctgaattcgcccaacggt
gataccaagaccatgatcctgcgggaaagctgtcagccccctgagcttgctgccctgcct
acgccggagtccacccctgtgcttcagcagaaaggcctccagcccatcaacaaccagtgg
gagagggctcagggcaaggtcagtgggccctgtaaggagtccaactcatcagcagcagca
aagagtcctcagttccttctttcctctcctgctcctccaaacgccaacgccaacccccac
aaccctcaccttgccctaggacactcccacatcccgagtgcagttgttttacccaatgcc
acacatgaccacccaaaccttgaggtggtcatgtgtggtgatgatacactcccacattcc
tctgaaaagaaaccgaagaacccagattccaggggaagtaggaaggagcagaagaggtcg
gtggatgccagaaatactctaaatgaccttttaaaacacctcaatgactctgtggccaac
cccaaggccattcttcaagagggatcagggcctcgcccgagacagcatctcacactggag
cccatggaggagctgactgaattaccccccagggtgcccagccgtgaggcttccctgtac
tctccctcctcctccctaccgaggcacagccccactaagagggttgatgtccccatgccc
accacccccaccacaccaacaggtagcctgagcatggggggcactctggagcggcaaaga
ggggggtaccagctccaccggagtgcgtctcataggcagtccttatccacctcaccaaat
ggggtaaccatgggagtgtctttgtctcgccaacacagtatgaacagaggtggttatatg
cccccaacacccccctccagacttgactctcatagtggaatgatggcggcaggactgcac
tcccctcacccgtcctctatgtcacgacagagcaactacagtgggcatggctcgctccct
cgcacagggcttaaacggaccccatcgctaaagccagatgtgccccccaaacccaacggg
ttttcaccacagagtccacagatgcgagttgtcaataagtacagttattaa
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