Hippoglossus stenolepis (Pacific halibut): 118114485
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Entry
118114485 CDS
T08308
Symbol
itga2.2
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03271
Virion - Rotavirus
hsp04145
Phagosome
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
hsp04810
Regulation of actin cytoskeleton
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
118114485 (itga2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118114485 (itga2.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118114485 (itga2.2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118114485 (itga2.2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118114485 (itga2.2)
04810 Regulation of actin cytoskeleton
118114485 (itga2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118114485 (itga2.2)
04515 Cell adhesion molecules [BR:
hsp04515
]
118114485 (itga2.2)
04090 CD molecules [BR:
hsp04090
]
118114485 (itga2.2)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118114485 (itga2.2)
Exosomal proteins of bladder cancer cells
118114485 (itga2.2)
Cell adhesion molecules [BR:
hsp04515
]
Integrins
Integrin alpha subunits
118114485 (itga2.2)
CD molecules [BR:
hsp04090
]
Proteins
118114485 (itga2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
118114485
NCBI-ProteinID:
XP_035020813
LinkDB
All DBs
Position
9:22373335..22388295
Genome browser
AA seq
1185 aa
AA seq
DB search
MELIWRNICFVLTLLSDSVWQSQSFNVGTAGAKIFSGPAAEEFGYTVLQTTNHEGKWLLV
GAPWGGYKRNTKGDVYKCPVAGARNSCDKLNLQDSVSIPDVRNLNDNMHLGLTLTRMPAV
NGLMTCGPLWGQVCGNQNFYPGICAKMNPLFKPQPAFSPAVQTCGGPMDIVIVLDGSNSI
YPWQPMNDFLQKLIPTLDIGPRSTQVSVIQYGVNARFEFKLNDYKTKEDVLKAASGITQM
YGGSTNTFHAIEFANQWGFNQKHGARPGAAKVMVVVTDGESHDKHFRDTVIGECDKAGIT
RFGIAVLGYYIRNDINTENLITEIKSIASLPTEKFFFNVSEEAALSTITGTLGNRIFNIE
GTGKGGDNFKMEMSQVGFSAHYSSQQDVMMLGAVGAYAWSGTVVHQKGSKVDILPFSAFE
AALQDRNHSSLLGYSVTTLTDGSALYFVAGAPRSNHSGQVIVYTVNAQKQTAIIDSERGK
QIGSYFGSVLCSLDVDKDGTTDILLVGAPMFMSELNREEGRVYVFSVTKGILNEQGFLNG
PDPTENARFGMAISVIPDLDLDGFNDVVVGSPLEDRQKGVIYIYNGDKKTLNKDFSQRIF
GSKLDPQLRFFGRSLDSFQDLNGDSLPDISIGAYGKVVQLWSRGVASVSTKASFNPDKIN
IFHKPCNVHGRKHSCFKANLCFSAAFRPKNPVGPIDISYTLTLDADLQASRVTSRGMFTK
NNERFLTENAKISSTPLCRDYEVYVQETPDFVNSLSLKVEIEQKNPDVNPVLDKFSPSAS
QFFIPFTKDCGSDDVCISDLVLSVTTDSKKSSSAPILVSANNRELSFEVVVRNKKENAYN
TRVSATFSSNLYYSSVVPPTDSVKCTSTQTQTVTCLVGYPALKTNEEVKFQLNFEYSLDQ
MQNQAEVNFEAKSDGKEERPADNKVDISIPVRYDAGIVLSRQSNINFYVANATNAPVTTV
KTLDDIGPEFNFTVKVSTGNFAVNLLYLTIGLPMMTKGGNNLLYVTKVVTQTGGSVSCDS
SSLVDRLKIGGKTQKVTFSEESLRGMDVLDCKTAKCEYIKCNLKDTDVKSDYFVMVKTRI
WSGTFNLATYQTIELTSSVALEASNPDLVIIGLKELPVVLTISKPGETADVPVGVIVGSA
IGGLALLALAVGLLWKFGFFKRKYKQLQMEADEDGQSHAHVNEVL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggagctcatctggaggaacatctgcttcgtcctcacactcctctctgacagcgtctgg
cagtcacagtccttcaacgtcggcaccgcgggcgccaagatcttcagtggtccagcggcg
gaggagttcggctacacagtcctgcagacgaccaaccatgaaggcaaatggctcctggtc
ggcgctccgtggggtggttacaagcgaaacaccaagggggatgtttacaagtgtccagtc
gcaggggccaggaacagctgcgacaagctcaatcttcaagattctgtcagtattccagat
gtcagaaacctcaacgacaacatgcacctgggtttgactctcacccggatgcctgcagtc
aatggtttgatgacgtgcggtcctctgtggggacaggtgtgtggcaatcagaacttctac
cctggaatatgtgcaaaaatgaatcccctcttcaagcctcagccggccttctctcccgcc
gtccagacatgtggaggacctatggacattgtgattgttctagacggctccaacagcatt
tatccttggcaaccaatgaacgatttcctccagaaactaatccccacgctggacatcggg
ccccgaagcacacaggtcagtgtcattcagtatggcgttaatgcccggtttgaattcaaa
ctgaacgactataaaaccaaagaagatgtgctgaaagcagcgtccggaatcacacagatg
tacggtgggtcaaccaataccttccacgccatcgagttcgccaatcagtggggtttcaat
caaaagcatggagctcgaccgggcgctgccaaggtgatggtggtcgtcactgatggagag
tctcatgacaaacatttcagggacacggtcattggagaatgtgataaagcaggcatcacc
cgctttggtatcgctgtcctgggttattatattagaaacgacatcaacacagagaacctg
ataacagaaatcaaatccatcgccagtttacccacagagaagttcttcttcaatgtgtcc
gaggaggcggctctctccaccatcaccggaacactggggaaccgcatcttcaacatagaa
ggcaccggaaaagggggagacaacttcaaaatggagatgtcccaggttggattcagcgcc
cactactccagccagcaggacgtgatgatgctgggagcagtgggagcttacgcctggagc
gggactgttgtccatcaaaaaggatccaaagtcgacattctccctttctcagcctttgag
gcggcccttcaagacagaaaccacagctcactactgggttactctgtcaccacactgacc
gatggctccgctctgtactttgtggccggggctcctcgctccaaccactctggacaagtt
atcgtctacaccgtcaacgctcagaagcaaaccgctatcatcgattcagaaagagggaaa
cagatcgggtcctactttgggagcgtcttgtgctccctggacgtggacaaagacgggacg
acggacatcttactggtgggggcgcccatgttcatgagcgagctgaacagagaagagggc
agggtctatgtcttctctgtcaccaagggtattctgaacgagcagggattcctcaatggt
cctgacccgactgaaaatgcacgtttcgggatggccatctccgtcattcccgacctggac
ctcgacggtttcaacgacgtcgttgttggatcgccactagaggacagacagaaaggtgtc
atttacatctacaatggagacaagaagacattaaacaaagacttctcacagagaatcttt
ggctccaaactggatcctcaactgcgtttttttggaaggtccctcgatagcttccaagat
ctgaatggtgattcgctcccagacatctcaatcggtgcctatggaaaagtggtgcagctc
tggtcccgaggtgtggcgtcggtctcaactaaagcttctttcaaccccgataaaatcaac
attttccacaaaccctgtaacgtacacgggcgcaagcattcgtgtttcaaggccaacctc
tgcttcagtgctgcgttcaggccgaagaatcctgttggacccatcgacatatcttacacc
ttgactctggacgcggacctacaagcttcacgagtgacgtcaagaggaatgttcacaaaa
aacaatgaacgcttcctcacagaaaacgcaaagatatcgtctacccccctctgccgagac
tacgaggtttacgttcaggagacaccagacttcgtcaattccctcagtttaaaggtggaa
atcgagcagaagaatccggatgtgaatcccgtcctggataagttttctcccagtgcctcg
cagttctttatccccttcactaaagactgtggctctgatgatgtgtgcatcagtgatctg
gtgctgagtgtgaccacagactctaagaagtccagctcagctcccatcctggtcagtgcc
aacaaccgagagctgtcgtttgaagttgttgtgaggaacaaaaaggagaacgcgtacaac
actcgggtgtcggccacgttctccagcaacctctactactcctccgtcgttcctcctacg
gacagtgtcaaatgcacctcgacacaaacacaaactgtcacttgtctagtgggatatcca
gcattgaagacaaatgaagaggtgaaatttcagctaaattttgaatacagtctcgatcaa
atgcaaaaccaagctgaggtgaatttcgaggctaagagcgacggtaaagaggaaagacct
gcagacaacaaggtggacatatccattcctgtccgatatgatgcagggattgttttatcc
aggcagtcaaacatcaacttttacgtggcgaatgcgaccaacgcgcctgtgactacggtg
aaaactctggatgacatcggcccagagtttaactttacagtgaaggtctcaacagggaac
tttgcggtgaacctcctgtatctgaccattggtctgcccatgatgactaaaggtggaaat
aatctcctctacgtcaccaaagtggtcacacaaacaggaggttctgtcagctgtgattcc
agcagcctggttgatcgtctgaagatcggtgggaaaacacaaaaagtgactttctccgag
gagagcctccgaggcatggacgtgctggattgcaaaactgcaaaatgtgagtatatcaaa
tgcaacctcaaagacactgacgtaaagagcgactactttgtgatggtgaaaaccaggatc
tggagcggcacgtttaatctggccacctatcagaccatcgagctcacctccagtgtggct
ctggaagcctccaaccccgacctggtcattatcggactcaaagagctgccagtggtgctg
accatcagtaaaccaggggagacggctgatgttccggtgggagtgatcgtcggcagcgct
ataggcggactggcgctgctggctctggcagtaggattactgtggaagtttgggtttttc
aaaagaaagtacaagcagctgcagatggaggccgatgaagacggacagagtcatgcacat
gtcaatgaggtgctgtga
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integrated database retrieval system
