Hippoglossus stenolepis (Pacific halibut): 118114600
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Entry
118114600 CDS
T08308
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118114600
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118114600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
118114600
NCBI-ProteinID:
XP_035021021
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Position
9:complement(26187836..26231634)
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AA seq
676 aa
AA seq
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MRSFRSFAHDDRHVMAKHASIYPAPEELEAVQTLVSTVEGALKKVSDWMDGLSKSSGKTS
TENEAADDGVEDDAAESKLKATSVLCGVTRVGLVAKGLLIKGDLDLELVLMCREKPTKLL
LYTVSANLPLQIQTMTEDKYEVRSCVPEAAIRVCSSKNPQLTLKITLSSLAMRDERHSST
DEEKGDRDVHKDEEEEDEDDVLDRHKCRAALALLRHAKWFQARVTDLKSCVIILRILRDM
CNTLPAWQPLKGWPLELICEKAIATCNRPLGPGEALRRVMECVASGILLPGGPGVHDPCE
RGPTDVLSDLSAQQADAITDSAQHALRLLAFGQLYKVLNMDPLPASKPSPRLFEGGCQKR
LREDVGSDDRDLIKRMKVLDWRMTDPNHPMNALMRLNQIHPGLQYRLLSQSGPVHAPVFT
MSVEIQGTTYQATGNSKRTAKLQVALKALQALGFVLAGDGDVDSLSADEKSDGEGKNDRM
SSSSSSTSITSSTDTQESRAPGPILTAGGKNPVMELNEKRRGLKYELISESGSSYDKRFI
IEVEVDKQVFRGTGPNKKVAKASAALAALNSLFSGCKSTSSKKKRPNPPPKRPMASMLTL
PALAARPPRVPVIPRAPYISTPPTHGYIPPGFGAPYGYSPAGALPAYGGLYIDSAYYQPQ
TIHTPIIIHLGPQDLF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgttccgatcgttcgcacatgacgaccgccatgtcatggccaagcacgccagc
atctatccggcgcccgaggaactggaggccgtgcagacgctggtgtccaccgtggaggga
gccctcaagaaagtgtcagattggatggacggcctcagcaaatcctcagggaagacgtcc
actgaaaacgaggcagcggacgacggagtggaggatgatgctgctgagtcgaagctgaag
gccacgtcagtgctgtgcggggtgacgcgtgtcggcctggtggcgaagggcctgctgatc
aaaggagacctggacctggaactggtgctgatgtgccgagagaaacccacgaagctgctg
ctgtacaccgtcagcgccaacctccccctgcagatccagacgatgacggaggacaaatac
gaggtgcggtcgtgtgtccccgaggcagctatccgggtctgcagctccaaaaaccctcaa
ctcacgctgaagatcaccctctcctcgttagccatgagggacgagcggcacagcagcact
gacgaagagaagggcgatcgagacgtccacaaggacgaggaggaagaggacgaagacgat
gtcctggacaggcacaagtgccgggcagcgctggctttgctccgacatgccaaatggttc
caggcccgtgtcacagacctcaagtcctgcgtcatcatcttgaggatcctcagagacatg
tgcaacacactgccagcgtggcagcccctcaaaggatggcctctggagctgatctgtgaa
aaggccatagccacctgcaaccggccgctgggtcccggtgaggccctgcgtcgcgtcatg
gagtgcgtcgcctcagggatcctcctgccaggaggtccaggagttcatgacccctgtgaa
cggggacctactgacgtcctgtctgacctcagcgcccagcaggcggacgccatcacagac
agcgcacagcatgcgttacgcctcctcgccttcggacagctttacaaggtcttgaatatg
gatcctctccctgcgagcaaaccctcgccaagactgtttgaaggcggttgtcagaagagg
ctccgggaggacgtcgggtcggatgacagagacctcatcaaaaggatgaaagtcctggac
tggaggatgactgatccgaaccaccccatgaacgccctgatgcgtctgaaccagatccac
ccgggtctccagtaccgcctgctgtcccagtccggcccggtccacgctccggtcttcacc
atgtccgtggagatccagggaaccacctaccaggccacggggaactccaagagaaccgcc
aagctccaagtcgccctcaaggcgctgcaggctctgggcttcgttctcgccggcgacgga
gacgtggactcgctgagcgccgacgagaagtcagatggcgaaggcaagaacgacaggatg
tccagcagctccagctccacctccatcacctcctccacagacacacaggagtccagagct
ccaggtccgattctgacggcgggaggtaagaacccggtgatggagctgaacgagaaacgc
cgcggcctcaagtatgagctgatctcagagagcggcagcagctacgacaagcgcttcatc
atagaggtggaagtggacaagcaggtttttcggggaacgggtcccaataagaaagtagcc
aaagcgagcgcagcgttagccgccctgaacagcctgttctccggctgcaaatccacgagc
agcaagaagaaacggcccaatcctccgccaaagcgaccgatggcgtcgatgctgaccctc
ccggccctcgctgccagacctccacgggtccccgtcatccccagagctccctacatcagc
accccccccacacacggatacatccccccaggtttcggcgctccctacggttacagccct
gcaggggccctccctgcctacggcggcctgtacatcgacagtgcctattaccagccgcag
accatccacacccctataatcatccacctgggccctcaggatcttttctga
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