Hippoglossus stenolepis (Pacific halibut): 118114620
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Entry
118114620 CDS
T08308
Symbol
si:ch211-225b11.4
Name
(RefSeq) thyroid adenoma-associated protein homolog
KO
K24169
thyroid adenoma-associated protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118114620 (si:ch211-225b11.4)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
118114620 (si:ch211-225b11.4)
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Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
HEAT
Vitellogenin_N
Motif
Other DBs
NCBI-GeneID:
118114620
NCBI-ProteinID:
XP_035021045
LinkDB
All DBs
Position
9:complement(15832272..15846168)
Genome browser
AA seq
1870 aa
AA seq
DB search
MLSCEDLMQSLQECVISGDRTPEHVRHTLRLFTDKLSQSSRSGVKRCKERCLEEAAQLLR
APEAQLGGLEESHLLLLVKLLLSMQLQTANISSACRKVDQMLQHLAKVDHQLVFRETRHC
LLSIVHTDQIMSIEDLQRACMFLEDSSVGREVWRESYLSLLNKVSELFPVVLLQESLRDG
PLCYTAVKLCLQIFQLLSSELAPLVWEKTHSSSAVQTILQALVDIMLGQCCNRDIRLLAG
SAVAMLINTAPESRAGGAAAWSLLQVSASEPWLLTVGALQIQCTLTGNEAVARLAVSRGL
LTCCRPHILLSSRVDATEMCLLLNGLFPLVYTLCEEKLDCHHFAFEVLALWLKRVKECLS
EIWRMTGVSLLPDNSRLQQQLVHTIWTNAESPVEGVSEFVRGAFCLLLDVYEKDCEHFCD
TKKILYSTLLQRIIELPWETKAKYHRLCALLPYLGTDTVLDQYAAIPNHLLKCLSANHLS
PCGSELYKCLIQQQRRELCDGSESRSELYLADQWARRWRPILHEAMTSDVPLLQNNSSSH
LLPSTFQVFPSAVDHLLAALDPFAPGHLHAWACVMSSYRASTGGSPWALQGSSTLETLRL
ALGSAEDKVRLAALNLLCCSPKTKETPTTEEMSLMRMFIPQNLNCESSPFRQHFQAGVKR
FVVRIRDSCLARVRGQKGKKKEEATHSEDILEQGIGFVEWLGQLPYSYLAPGHSYQRKKT
VLLLLSVVLETCTDTWSPDKKKGQPPANIGSLIENARQRGQWDFFSRTKQLVLISCLEDS
TNEIRELSAALLLRFFPPSFPDDIATVLLIRTKQLLCSPRVQESQMGALTMKLLLLKSQQ
QPEDGRLNGDFSVSSGSDSSCMMRFLVKELEEHYLTAKADMILAARTKPIHGVVSALQRC
LVEAGSSVHDTLDRSLTAELLVLLENISLLLLGVLYGDQEACTTENDAPPSFCEMGNAIS
SLIAQTSEGGQVDEEECVLLSVEHSLVLTCCWVSLKEIGIFLGFLVDKLLTEFKPSKHLL
EKEDLIRASKVFKNILLKCRHWGAVEGCCIGFTKFCASLLSSSDPELRDIPAHMLRQGLQ
VVQCPRSTSVTRRAAGLPMLILCVVSAEEASKARPLLAHSMQTLLETAKTPLPQNWDQTL
DLPQVCAVHTLQALVRGSGLGVAVLQFAPPVAIVSLTLLSSACWAMRNAALQLYSSLCSR
MLGQRPSSEESGPTQHCMSPAAFFLHYPALQPFLLGELRGAAQDLQTQPNEAKLHLQPSL
YPVLTLLAQLQPGVQDSTETLSDFLPPLLQLAASPIYSVRVMASKALVAMTPPSEYMNIL
VKLAAQLPGPQERCCHNRLHGQLLQIKAVLERALISADSAPPPALSEVLSKVDESLWLVT
EAQRCPLVRAVYLGVADSLRRFCCETFLSKIRDILMHDLQTPQTGLQVGLSSFHQRAIHF
LCADLKWACQIWNSFPAASPDLKLSLVTWVADGQGSQQTSLKEVMQRVLQSNLREALLSH
SVEYRRTYLTALVAVMAAGAESSLPQHLPQSASLQEPDLSECVDLLLGDLEEQRGGPEFL
SQALCAASLLLPQRSGSSLQISTLQRWCGILECHRCPDAPEVLRMACAEALCVAGVSLMS
HSLKKHSTLMIRLINTGLYLLQDQDQQVRLKAACFTSMLHHVRRGESQRRVYVMQVNQAV
PLLLELLLEDCSDAPGTLEVLLCHLPQSDLRRVLTEASEKGCFSLYEQDQANVFAEPSVM
SAHVLPHLLQVAVKHSESSALAQSLSAWVEQSVEQVSDSLAVCKELQPAEILTPAWLSLL
MDHWFHSTLCSLFTRAAFLLRLLETCDGARRLCDPSSLRTSLQQVLSLLGQNGVHFPSAL
TAALAGERPL
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtgtgaagatctgatgcaaagtctgcaggagtgtgtgatcagcggggatcga
actcccgaacatgtccgtcacacactcaggctcttcactgacaaactgtctcaatcctcc
aggagcggtgtgaagagatgcaaggagcgctgtttggaggaggctgctcagctgctcaga
gccccggaggctcagctcgggggtttagaggagagccacctcctgctcctggtcaaactg
ctcctctccatgcagctgcagacggccaacatctcctcagcctgtcgcaaagtggaccag
atgctgcaacatctggccaaggtggaccaccaactggtgtttagagaaactcgccactgt
ttgctctccatagtccacactgaccagataatgtccattgaggatttacagagagcctgc
atgttcctggaggacagcagtgttggtcgtgaggtttggcgagagtcgtatctgtccttg
ctgaacaaagtgtccgagttatttcctgttgtattgctacaagagtccctgagagatgga
ccgctgtgttacactgctgtgaagttgtgcctgcagatattccagctgctgtccagtgag
ctggctcctctagtgtgggagaagacacacagcagctcagcggtgcagacgatcctgcag
gcgctcgtggacattatgcttggacagtgctgcaacagggacattcgtcttttggccggc
tctgctgtggccatgctgatcaacacagcaccagagagcagagctgggggagctgctgcc
tggagtctgctgcaggtctctgcctcagagccctggctgctgactgttggcgctctccag
atacagtgcaccctgacaggaaatgaggcagtggcgaggctggctgtgagcaggggcctc
ctgacctgctgtcgacctcacatcttgctcagttcacgcgtggatgccacagaaatgtgt
ttactgctgaatggtttgtttcctctggtctacactttgtgtgaggagaagctggattgt
caccactttgccttcgaagttttggcactgtggctgaagagggttaaagaatgtctgtct
gagatctggaggatgacgggtgtctcccttctgccggacaacagcagactgcagcaacag
ctggttcacaccatctggaccaatgcagaaagcccagtggaaggcgtgtctgaattcgtc
cgcggtgccttctgtctgctgctggacgtctacgagaaggactgtgaacacttctgtgac
acaaagaagattctttattctactttacttcagcgaataattgaactgccttgggaaaca
aaagccaaatatcatcgcctttgtgccctgctgccatatctgggtactgacacggtgctg
gatcaatatgctgcaatacccaatcatctcctgaagtgcctgtcagccaatcacctctca
ccgtgtggatcggagctttacaagtgtctgatccagcagcagagacgggagctgtgtgat
ggctctgaatcacgctccgagctttatctggcagatcagtgggcgaggcgttggcggccc
atccttcacgaggcgatgacttctgatgtgcctcttctacagaacaacagctcgtcgcac
ttactcccctccacctttcaagtcttcccctctgctgtggatcatctgctggccgctctg
gacccgttcgcccccggccacctccacgcctgggcctgcgtcatgagctcctaccgagcc
tcgactggaggttctccctgggctctgcagggcagctcaaccctggaaaccctccggctg
gctctaggatctgcagaagacaaagtccgtctcgctgctctgaacctcctgtgctgcagc
ccaaagaccaaagagactccaaccacagaggagatgtcgctaatgaggatgtttattcct
cagaacctgaactgtgagtcttcgccgtttcgccagcattttcaggctggagtcaagagg
tttgtggttcgtatcagagacagctgcttagcacgtgttagaggacaaaagggcaagaag
aaagaagaggccacccactcagaggatatactggagcagggaatagggtttgtggaatgg
ctgggtcaacttccgtacagttatctggcaccaggacacagttatcagaggaagaagact
gtgctgctgttgctgtctgtggtgctggaaacctgcacagacacctggagcccagacaaa
aagaagggacaacctccagcaaacattgggtctcttattgaaaatgccagacaaagagga
cagtgggatttcttcagcaggaccaagcagctggtgcttatcagctgtttagaagattct
accaatgagatccgggagctctcagctgcgttactgttgagatttttcccgcccagtttt
ccagacgatatcgccacagtgctgctcattcgaaccaaacagctcctgtgcagtcctcgg
gtgcaggagagtcagatgggagcgctgacgatgaagctcctccttctgaaatcacagcag
cagcctgaagatggcagactgaacggcgactttagtgtcagcagtggaagtgactcctcc
tgcatgatgaggttcctggtgaaggagctggaggagcactatctgacagctaaggctgat
atgattcttgctgccagaactaagcccatacatggtgttgttagtgccctacagaggtgt
ttggttgaggcaggcagcagcgtccatgacacactcgaccgcagtctgacagctgagctg
ctggttctgctggagaacatctccctgctgctgctgggcgttctgtacggagaccaggag
gcttgtaccactgaaaacgatgccccaccttctttttgtgaaatgggaaacgccatcagc
tcgttgatagcccaaacatccgaaggaggccaagtggatgaagaggagtgtgtcctgctg
tctgtagagcacagcctcgttctcacctgctgctgggtctcactcaaggaaataggaatc
tttttaggttttctggtggataaacttctcaccgagttcaaacccagcaaacaccttcta
gagaaagaagatctgatcagagcatcgaaagttttcaagaatattcttctcaaatgccgt
cactggggggcagtagagggatgctgtattggcttcactaagttctgtgcctctctgttg
agcagcagtgacccagagctcagagatattccagcccacatgttgagacaaggattgcag
gtcgtgcagtgtcctcgctctacgtcggtgactcggcgggctgcagggttgcctatgctc
atcctgtgtgttgtatctgcagaggaggccagtaaagcaaggccactgttagcccacagc
atgcagaccttgctggagacggccaaaacgcctctgccgcaaaactgggaccaaactctg
gacctgccacaggtgtgtgcggttcacacgctgcaggcgctggtgcgtggctcaggtctg
ggagtagctgtgcttcagtttgctccacctgtagccatcgtgtcactcactctgctcagc
tctgcgtgctgggccatgaggaatgctgcgctgcaactctacagttctctgtgctcgcga
atgctcggccagaggccaagcagtgaagaaagcggccctacccagcactgcatgtccccc
gccgccttcttcctccactaccccgctctccagcccttcctcctcggcgagctgaggggg
gcagcacaagacctgcagactcagcccaatgaagccaagcttcacctccaaccctcgctc
taccctgtgctcacgctgctcgctcaactccagcctggagtgcaagattcaacagaaact
ttgtcggacttcctgcctcctctgctccagctggctgccagcccaatttacagtgtgaga
gtcatggcttctaaggctttggttgccatgactcccccctcggagtacatgaacatcctc
gtcaaactggcagctcaactgcccgggcctcaggagcgctgctgtcacaaccggctccac
ggacagctgctgcagatcaaagctgttctagagagagctctgatctctgcagacagtgct
cctcctcccgctctgtccgaggtgctgagtaaagtagatgagtcgctgtggctggtgact
gaagcccaacgctgccccctagtgagagcggtctacctcggagtggcagactcgctcaga
agattctgctgtgagaccttcctgtcaaagatccgtgacattctcatgcacgacctccaa
acaccccaaactgggcttcaggttggtctgtcgtccttccatcagcgagccatccacttt
ctatgtgcggatctgaagtgggcgtgccaaatctggaacagcttccctgcagcgagccct
gatctgaagctctctctggttacgtgggtggcggatgggcagggttcgcagcagaccagt
ttgaaagaggtgatgcagagggtgttgcagtcaaacctgagggaggcattgttgagtcac
agcgtggagtaccgcaggacctacctcaccgccctggtggcagtgatggctgctggagca
gagtcttctttacctcaacatcttcctcagtcggcctctcttcaggagccagatctgtcc
gagtgtgtggatttgttgctcggggacctggaggagcagcgaggtggtccagagtttctg
tcccaggctctgtgtgcagcgagtctgctgcttccccagcgctcaggctccagtctacag
atatccacgctccagcgctggtgtggcatcttggaatgccaccggtgcccagacgcccct
gaggtgctcaggatggcgtgtgctgaagctctgtgcgtggctggagtttccctgatgagc
cacagcctgaaaaaacacagtactctcatgattaggttgatcaacacaggcctttacttg
ctgcaggaccaagaccagcaggtgagattaaaagcagcttgttttacctccatgctgcac
catgtgagaaggggagagagccagcggagagtgtacgttatgcaggtgaaccaggccgtg
ccgctcctgctggagctgctgctggaggattgctctgatgctcccggcacactggaggtg
ctgctgtgtcacctgcctcagtctgacctcagacgtgtgctgacagaggcttcagagaag
gggtgtttcagtttgtatgagcaggatcaggccaacgtgtttgctgaaccctctgtgatg
tcagcacatgtgctgcctcacctgctgcaggtggctgttaaacactctgaatcctctgct
ttggcacagagcctgagtgcctgggtagagcagagtgttgaacaggtctctgacagcctt
gcagtgtgcaaagagctccagccagcggagatattgaccccggcctggctgtctctcctc
atggaccactggtttcacagcaccctgtgtagcctgttcaccagggccgccttcctcctc
cgactgttggaaacatgtgatggtgcacgacgcctgtgtgatccttcgtccctgcgtacg
agtttacagcaagttttgagtctgctcggtcagaacggtgtccactttccctctgctcta
acagctgctctggctggagagcggccactgtga
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