Hippoglossus stenolepis (Pacific halibut): 118114670
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Entry
118114670 CDS
T08308
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04140
Autophagy - animal
hsp04150
mTOR signaling pathway
hsp04218
Cellular senescence
hsp04910
Insulin signaling pathway
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118114670 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118114670 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
118114670 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118114670 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118114670 (tsc1a)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
118114670
NCBI-ProteinID:
XP_035021119
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All DBs
Position
9:28944878..28961750
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AA seq
1053 aa
AA seq
DB search
MSKEQVTISELLLSLDSSELQEAEQVRATVNQQLSSDRGGAVLSSLVEYYLDSSSSQAVL
LLSTIREPHHKLLLEKLHESLNRPGTRLAALTLLGHLIRKQPPWVHHISRSPLLPSLLRY
LKTDSDVAVLITAVLVLITLLPMIPQAGKQHIYDFFDVFGRLASWSYKNPGHVPVVHLVH
LHAGVYSLFHRLYGMFPCNFISYLRLHYSMKENLDTFQEIVKPMLEHVRVHPELVTGTQD
YELDPSRWRCYEVHDIVIECSRVSLDPLESSCEDDSFSSLRDPPSSPSPRPPPLSSPLPP
LDLTCIDGVSSTGSSTCPALPQLTFDTCTQADDVTWSPSSHCGLSTPPPEPAATDSTHPP
SRTASISAVECPPSSSVPVTSLSEYNQDGGLTPQDNHQVKQQPIPELERSSSQPVTEKEE
RVQSDVINSSGDSTPPQHILLTSTPSCGQSDSPLPRPPPSISLCFTPPTRSEEGGLFDQS
PAFPYEPLFELALPRAAQLFIGRKTQEVLERAAGQQETGGGGGGVEGEDKKQDQTSVSPL
EALDQLIVYGRDAHERLSSRLSAVSRSVDRSHFGGKQQSMKTKGAVVGEELQSLRSQLLL
IHSQLQYERFKRQQHAIRNRRLLRRVINSTALEEQSIAMRAQLGVQDEEIRSLKLSLEEE
QRRYTQLQQDTHTHTNQLNTQIQQLLLQQQDEQTHNQRLQSDLQECQSRLRIVEAELQRA
NNKAYNSEHQLTQLSLKLSSSEQLQQQIFLMNQQLVLLRETNRALTNQLEGGGADRWTEA
SMLQCSVGKECQRLRDSEVQQRQKLEAANHRIVELENQLTRKDQCIQDQKKLLEDTKAQS
RAELSACDSRCVALQRVSQNLQTEMLHLYSQIHLETHSRPQDVCGRPNGGSVALPVAQSS
LRPRPSSSSVGIINGVVSTSPLHLPSCSSSPLSLSPIESPLAVGSFLEQRARQLFGPTNH
SPEEEEEVEEVEDEDEEVQSETLLLDHEVEEATLLSENPQMAPPSLATAHSFTAFKPAAL
PPGPAPPADLTLAVRQRRHELSIMDYDETLPEY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggagcaggtgactatcagtgagctcctgctctcattggacagttcggagctg
caggaggcggagcaggtgagggcgacagtcaaccagcagctgagctcagacagaggaggt
gcggttctctcctctctggtggagtattaccttgactcctcgtcgtctcaggcagttctc
ctcctgtcgaccatcagagaacctcatcacaagctgctgttggagaagctccacgagtct
ctgaacagacctggaaccagattggctgctctgactctgctgggtcacctgatacgcaag
caaccgccatgggttcatcacatcagccgctccccactgctgccgtcactgctgcgctac
ctcaagacagacagtgatgtggccgttctcatcactgcagtccttgtcctcatcactctg
ttacccatgatccctcaggccgggaaacagcacatctacgactttttcgacgtgttcgga
cgcctcgcatcctggagttataaaaaccccggtcatgtacctgtggttcacctggtccac
cttcatgcaggtgtgtactcactgttccaccgtctctacgggatgttcccctgtaacttc
atctcctacctgaggctgcactacagcatgaaggagaacctggacaccttccaggaaatc
gtcaagccgatgttggaacatgtaagggttcaccctgagttggtcacagggactcaggac
tatgaactggacccgtccagatggaggtgttatgaagtccatgacatcgtgatcgagtgt
tccagagtgtctctggatcctctggagtcgtcatgtgaggacgacagtttctcctccctc
agagaccccccttcctcaccctcacccagacccccccctctgtcctcccccctccccccg
ctcgacctcacctgcatagatggcgtcagcagcacaggaagctcaacgtgtccggctctg
cctcagttgacctttgacacttgcacacaggctgatgatgtcacatggagcccctcctct
cactgtggtttgtcgacgcccccccctgaacctgctgccaccgactccacccacccacca
agcagaaccgcatccatctcagctgtggaatgtcctccatcttcctctgtccctgtgaca
tcactgagcgaatacaaccaggacggaggtctgactcctcaggacaaccaccaggtgaag
cagcagccaatccctgagctggagaggtcatccagtcagccagtcacagagaaggaggag
agagttcaaagtgatgtcatcaacagcagcggagactccaccccccctcagcacatcctc
ctcacctctacccccagctgtggccagtcagactcacccctcccccgtcctcccccctcc
atctcactctgcttcaccccaccaaccaggtcagaggagggaggcctctttgatcagagt
cccgccttcccatacgaacccctgtttgagctggctctgcctcgagccgcccaactcttc
atcgggaggaagactcaggaggtgctggagagagcagcaggtcagcaggagacgggggga
ggtgggggaggagtggagggagaggacaagaagcaggatcagacctccgtctcccctctg
gaggctctggaccagctgatcgtctacggacgcgacgcccatgaacgcctgagcagtagg
ttgtcagcagtcagtaggtcggtggatcgaagtcattttggaggtaaacagcaaagcatg
aaaaccaaaggtgcggtcgtgggggaggagcttcagtcactgaggagtcagttgttgctg
atccacagtcagcttcagtacgaacgtttcaaacggcagcagcacgccatcagaaaccgc
cgcctgctgcgcagagtcatcaactctactgcgctggaggagcagagtatcgccatgagg
gctcagctgggcgttcaggacgaggagattcgttctctgaagttgagtcttgaggaagaa
cagagacgttacacacaactgcagcaggacacacacacacacaccaaccagctgaacaca
cagatccaacaactgctgctgcagcaacaggacgagcagacacacaaccagaggctgcag
agcgaccttcaggagtgtcagagcaggctgagaattgtggaggcggagcttcagagagcc
aataacaaggcctacaactctgagcatcagctgacccagctgtcactcaagttgagcagc
agtgaacagttgcagcagcagatcttcttgatgaaccagcagctcgtcctcctcagagaa
actaacagagctctgaccaatcagctggagggaggaggggccgaccgctggaccgaggcg
tccatgctgcagtgcagtgtgggtaaagagtgccagcgtctgagggacagcgaggtccag
cagagacagaagctggaggcagccaatcacaggatcgtggagcttgagaaccagctgacc
aggaaagatcagtgcatccaggatcagaagaaactcctggaggacaccaaggcccagagc
agagcggagttgtcggcctgtgacagtcgctgcgttgctctgcagagagtcagtcagaac
ctgcagactgagatgcttcacctgtacagtcagatccacctggaaactcacagtcgccct
caggacgtctgcggcaggcccaatggcggcagtgttgctttacctgttgctcagagcagc
ctcaggccccgcccctcctcttcttctgttggtataataaatggagtggtgtccacctcc
cccctgcacctcccgtcctgctcctcctcccctctctccctgtcccccatcgaatccccc
ctggccgtcggatcgttcctggagcagcgagcgcggcagctgttcggaccgaccaatcac
agcccggaggaggaggaggaggtggaggaggtggaggatgaggatgaggaggttcagtcg
gagacccttcttctggatcatgaagtggaggaggccaccctcctctcagagaaccctcag
atggcgcctccaagcctggctacagctcacagcttcaccgccttcaaacccgcagcgctc
cccccaggtcctgccccccctgcagacctgaccctcgctgttcgccagaggagacacgag
ctgagcattatggactacgacgagacgctgccagagtactga
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